RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 LIG1P18858 919 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 AXLP30530 894 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 SLC12A3P55017 1021 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 UBE3AQ05086 875 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 RAD51AP2Q09MP3 1159 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 FAM187BQ17R55 369 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 SPECC1Q5M775 1068 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 PLPP4Q5VZY2 271 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 NOTUMQ6P988 496 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 FEZF2Q8TBJ5 459 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
LETMD1-221ENST00000550100 KHSRPQ92945 711 aaKnown RBP eCLIP13.05□□□□□ -0.329e-6■■□□□ 14.4
LETMD1-221ENST00000550100 PDZD7Q9H5P4 517 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 RSAD1Q9HA92 442 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 BLOC1S4Q9NUP1 217 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 KLK14Q9P0G3 267 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 CACNG4Q9UBN1 327 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 LZTS1Q9Y250 596 aa13.05□□□□□ -0.32
LETMD1-221ENST00000550100 INPPL1O15357 1258 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 ITGA4P13612 1032 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 IGFBP6P24592 240 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 MARCKSP29966 332 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 NAMPTP43490 491 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 NPTX2P47972 431 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 PEX3P56589 373 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 KCNC3Q14003 757 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 AAK1Q2M2I8 961 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 PTCRAQ6ISU1 281 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 TAS1R1Q7RTX1 841 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 SYT2Q8N9I0 419 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 MICAL1Q8TDZ2 1067 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 RABGGTAQ92696 567 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 PGBD4Q96DM1 585 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 IGSF21Q96ID5 467 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 TCF25Q9BQ70 676 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 TRIOO75962 3097 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 ACKR2O00590 384 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 PRKCBP05771 671 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 PLA2G4BP0C869 781 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 MLH1P40692 756 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 SCNN1GP51170 649 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 KARSQ15046 597 aaKnown RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 SLC27A1Q6PCB7 646 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 CABP7Q86V35 215 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 COLGALT2Q8IYK4 626 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 EFHBQ8N7U6 833 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 KIFAP3Q92845 792 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 EPSTI1Q96J88 318 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 MRPL9Q9BYD2 267 aaKnown RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 TLE6Q9H808 572 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 PRMT7Q9NVM4 692 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 MARCH5Q9NX47 278 aa13.04□□□□□ -0.32
LETMD1-221ENST00000550100 FBXO2Q9UK22 296 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 BARX2Q9UMQ3 279 aaPredicted RBP13.04□□□□□ -0.32
LETMD1-221ENST00000550100 CNTNAP2Q9UHC6 1331 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 C2orf71A6NGG8 1288 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 TNFRSF10AO00220 468 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 NRP1O14786 923 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 EFEMP2O95967 443 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 SSBP05455 408 aaKnown RBP eCLIP13.03□□□□□ -0.32
LETMD1-221ENST00000550100 ALDH7A1P49419 539 aaKnown RBP13.03□□□□□ -0.32
LETMD1-221ENST00000550100 RNASELQ05823 741 aaKnown RBP13.03□□□□□ -0.32
LETMD1-221ENST00000550100 DSC1Q08554 894 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
LETMD1-221ENST00000550100 DUSP6Q16828 381 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 VPS52Q8N1B4 723 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 MRPL43Q8N983 215 aaKnown RBP13.03□□□□□ -0.32
LETMD1-221ENST00000550100 DEPTORQ8TB45 409 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 USP28Q96RU2 1077 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 SNTG2Q9NY99 539 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
LETMD1-221ENST00000550100 TRIP11Q15643 1979 aa13.02□□□□□ -0.32
LETMD1-221ENST00000550100 CCDC169A6NNP5 214 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 ABLIM1O14639 778 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 PTGESO14684 152 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 SLC16A4O15374 487 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 MEFVO15553 781 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-221ENST00000550100 STX6O43752 255 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 CXCL14O95715 111 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 PLCG1P19174 1290 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 PDCP20941 246 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 GUCY2CP25092 1073 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 KRT17Q04695 432 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 PKP1Q13835 747 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 MCM6Q14566 821 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 MAPK6Q16659 721 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 FOXD4L5Q5VV16 416 aaPredicted RBP13.02□□□□□ -0.33
LETMD1-221ENST00000550100 TMC7Q7Z402 723 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
LETMD1-221ENST00000550100 ZBTB8OSQ8IWT0 167 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 FAM178BQ8IXR5 827 aa13.02□□□□□ -0.33
LETMD1-221ENST00000550100 CNNM3Q8NE01 707 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms