RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 RXFP1Q9HBX9 757 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 WDR6Q9NNW5 1121 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 COL4A3BPQ9Y5P4 624 aa11.03□□□□□ -0.64
TRAFD1-207ENST00000550051 CCDC195A0A1B0GUA6 201 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 EML1O00423 815 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 GAS2O43903 313 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 P4HBP07237 508 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 SRGAP2CP0DJJ0 459 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 PSMA5P28066 241 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 NPEPPSP55786 919 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 CCT2P78371 535 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 POU5F1BQ06416 359 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 SSRP1Q08945 709 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 LAMTOR4Q0VGL1 99 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 NONOQ15233 471 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 PCBP1Q15365 356 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 ANGPT1Q15389 498 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 NPY5RQ15761 445 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 ELMSAN1Q6PJG2 1045 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 COLGALT2Q8IYK4 626 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 GPR65Q8IYL9 337 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 SIX5Q8N196 739 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 SLC44A3Q8N4M1 653 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 PSPC1Q8WXF1 523 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 SLC7A3Q8WY07 619 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 MINDY3Q9H8M7 445 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 EPS15L1Q9UBC2 864 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 DDX25Q9UHL0 483 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 FBXL21Q9UKT6 434 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.65
TRAFD1-207ENST00000550051 TEX28O15482 410 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 N4BP1O75113 896 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 DEXIO95424 95 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 POMCP01189 267 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 SSBP05455 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 ADH1AP07327 375 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 AXLP30530 894 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 RFC5P40937 340 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 ID4P47928 161 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 DSC1Q08554 894 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 PLA2G4FQ68DD2 849 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 PPP4R3AQ6IN85 833 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 POTEHQ6S545 545 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 TAS1R1Q7RTX1 841 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 C4orf19Q8IY42 314 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 SMG8Q8ND04 991 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 TCP11Q8WWU5 503 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 STAMQ92783 540 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 ZNF274Q96GC6 653 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 CEP170P1Q96L14 293 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 HERC2P3Q9BVR0 1158 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 PLEKHA4Q9H4M7 779 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 NCOA5Q9HCD5 579 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 KCNMB3Q9NPA1 279 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 MAN1C1Q9NR34 630 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 CHST7Q9NS84 486 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 VAV3Q9UKW4 847 aa11.01□□□□□ -0.65
TRAFD1-207ENST00000550051 DOCK8Q8NF50 2099 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 DCHS1Q96JQ0 3298 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 KRBA1A5PL33 1030 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 TBX3O15119 743 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 NARSO43776 548 aaKnown RBP11□□□□□ -0.65
TRAFD1-207ENST00000550051 URODP06132 367 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 SRFP11831 508 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 ITGA4P13612 1032 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 AK2P54819 239 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 DSG1Q02413 1049 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 EPHA7Q15375 998 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 PHLDB3Q6NSJ2 640 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 LILRA6Q6PI73 481 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 CENPQQ7L2Z9 268 aaPredicted RBP11□□□□□ -0.65
TRAFD1-207ENST00000550051 OTUD6AQ7L8S5 288 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 FERMT3Q86UX7 667 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 TMEM143Q96AN5 459 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 CCDC51Q96ER9 411 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 COLEC11Q9BWP8 271 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 MARCH5Q9NX47 278 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 MIOSQ9NXC5 875 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 FNIP2Q9P278 1114 aa11□□□□□ -0.65
TRAFD1-207ENST00000550051 WRAP73Q9P2S5 460 aaPredicted RBP11□□□□□ -0.65
TRAFD1-207ENST00000550051 TDRD15B5MCY1 1934 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 ARL5CA6NH57 179 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 ANHXE9PGG2 379 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 C2CD2LO14523 706 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 SLC37A4O43826 429 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 NR1I2O75469 434 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 GLUD1P00367 558 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 CFHP08603 1231 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 LAMP2P13473 410 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 GCFC2P16383 781 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 YWHABP31946 246 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 GBP2P32456 591 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 OR1G1P47890 313 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 GLUD2P49448 558 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 PTENP60484 403 aa10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 NCBP1Q09161 790 aaKnown RBP10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 TOB2Q14106 344 aaPredicted RBP10.99□□□□□ -0.65
TRAFD1-207ENST00000550051 MXD4Q14582 209 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms