RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 TOB1P50616 345 aaPredicted RBP18.1■□□□□ 0.49
VPS29-207ENST00000549970 FXR2P51116 673 aaKnown RBP eCLIP18.1■□□□□ 0.49
VPS29-207ENST00000549970 SYCE2Q6PIF2 218 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 RNF135Q8IUD6 432 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 SUSD6Q92537 303 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 CASP10Q92851 521 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 GAD1Q99259 594 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 NXF3Q9H4D5 531 aaKnown RBP18.1■□□□□ 0.49
VPS29-207ENST00000549970 UBN1Q9NPG3 1134 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 MUTYHQ9UIF7 546 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 KIF3AQ9Y496 699 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 PCDHB6Q9Y5E3 794 aa18.1■□□□□ 0.49
VPS29-207ENST00000549970 ARL5CA6NH57 179 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 CD2BP2O95400 341 aaKnown RBP18.09■□□□□ 0.49
VPS29-207ENST00000549970 NPTXRO95502 500 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 ALDH2P05091 517 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 PTGDRQ13258 359 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 ECM1Q16610 540 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 MCTP1Q6DN14 999 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 ZBTB8OSQ8IWT0 167 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 HACE1Q8IYU2 909 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 BSNDQ8WZ55 320 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 TMX3Q96JJ7 454 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 RPGRIP1Q96KN7 1286 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 ZFP42Q96MM3 310 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 TMEM175Q9BSA9 504 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 PHF7Q9BWX1 381 aaPredicted RBP18.09■□□□□ 0.49
VPS29-207ENST00000549970 VN1R3Q9BXE9 311 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 S1PR5Q9H228 398 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 LRWD1Q9UFC0 647 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 FAN1Q9Y2M0 1017 aa18.09■□□□□ 0.49
VPS29-207ENST00000549970 NRP1O14786 923 aa18.08■□□□□ 0.48
VPS29-207ENST00000549970 SSBP05455 408 aaKnown RBP eCLIP18.08■□□□□ 0.48
VPS29-207ENST00000549970 HOXB8P17481 243 aaPredicted RBP18.08■□□□□ 0.48
VPS29-207ENST00000549970 CYP11B2P19099 503 aa18.08■□□□□ 0.48
VPS29-207ENST00000549970 SCNN1GP51170 649 aa18.08■□□□□ 0.48
VPS29-207ENST00000549970 CBX2Q14781 532 aaPredicted RBP18.08■□□□□ 0.48
VPS29-207ENST00000549970 CDCA2Q69YH5 1023 aaPredicted RBP18.08■□□□□ 0.48
VPS29-207ENST00000549970 SLC27A1Q6PCB7 646 aa18.08■□□□□ 0.48
VPS29-207ENST00000549970 PRMT7Q9NVM4 692 aaPredicted RBP18.08■□□□□ 0.48
VPS29-207ENST00000549970 MIOSQ9NXC5 875 aa18.08■□□□□ 0.48
VPS29-207ENST00000549970 CDH22Q9UJ99 828 aa18.08■□□□□ 0.48
VPS29-207ENST00000549970 PRG3Q9Y2Y8 225 aaPredicted RBP18.08■□□□□ 0.48
VPS29-207ENST00000549970 TRIOO75962 3097 aa18.08■□□□□ 0.48
VPS29-207ENST00000549970 TDRD15B5MCY1 1934 aaKnown RBP18.08■□□□□ 0.48
VPS29-207ENST00000549970 A0A1B0GUA9 196 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 PRR33A8MZF0 331 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 LOC730098B7Z3J9 87 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 LIG1P18858 919 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 MUTP22033 750 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 AKAP5P24588 427 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 OR1G1P47890 313 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 GIT2Q14161 759 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 TPRNQ4KMQ1 711 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 COLGALT2Q8IYK4 626 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 SNX29Q8TEQ0 813 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 PRIMPOLQ96LW4 560 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 RAB34Q9BZG1 259 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 C2orf40Q9H1Z8 148 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 BHMT2Q9H2M3 363 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 POLD4Q9HCU8 107 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 KIAA1024Q9UPX6 916 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 GIT1Q9Y2X7 761 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 IRAK3Q9Y616 596 aa18.07■□□□□ 0.48
VPS29-207ENST00000549970 INPPL1O15357 1258 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 EPCAMP16422 314 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 SP100P23497 879 aaPredicted RBP18.06■□□□□ 0.48
VPS29-207ENST00000549970 GJB2P29033 226 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 PTPN14Q15678 1187 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 TMEM132AQ24JP5 1023 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 HERC4Q5GLZ8 1057 aaPredicted RBP18.06■□□□□ 0.48
VPS29-207ENST00000549970 IGSF22Q8N9C0 903 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 DEPTORQ8TB45 409 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 FZD8Q9H461 694 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 DDX19AQ9NUU7 478 aaKnown RBP18.06■□□□□ 0.48
VPS29-207ENST00000549970 MARCH5Q9NX47 278 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 KLK14Q9P0G3 267 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 PARP2Q9UGN5 583 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 HCN4Q9Y3Q4 1203 aa18.06■□□□□ 0.48
VPS29-207ENST00000549970 TTLL13PA6NNM8 815 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 PP2D1A8MPX8 630 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 H3BQV1 296 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 PRKCBP05771 671 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 NAMPTP43490 491 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 DSC1Q08554 894 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 PRPF4BQ13523 1007 aaKnown RBP18.05■□□□□ 0.48
VPS29-207ENST00000549970 PDIA5Q14554 519 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 MAPK6Q16659 721 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 FAM187BQ17R55 369 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 CES5AQ6NT32 575 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 C12orf76Q8N812 135 aaPredicted RBP18.05■□□□□ 0.48
VPS29-207ENST00000549970 KIFC3Q9BVG8 833 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.05■□□□□ 0.48
VPS29-207ENST00000549970 STK39Q9UEW8 545 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 USP20Q9Y2K6 914 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 STK24Q9Y6E0 443 aa18.05■□□□□ 0.48
VPS29-207ENST00000549970 LAD1O00515 517 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 C2CD2LO14523 706 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 SOD2P04179 222 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms