RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 HDAC7Q8WUI4 952 aa22.37■■□□□ 1.17
GATC-202ENST00000548171 NXPE3Q969Y0 559 aa22.37■■□□□ 1.17
GATC-202ENST00000548171 TMEM143Q96AN5 459 aa22.37■■□□□ 1.17
GATC-202ENST00000548171 CCDC51Q96ER9 411 aa22.37■■□□□ 1.17
GATC-202ENST00000548171 RXFP1Q9HBX9 757 aa22.37■■□□□ 1.17
GATC-202ENST00000548171 KCNMB3Q9NPA1 279 aa22.37■■□□□ 1.17
GATC-202ENST00000548171 MARCH5Q9NX47 278 aa22.37■■□□□ 1.17
GATC-202ENST00000548171 SLC37A4O43826 429 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 NR1I2O75469 434 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 REC8O95072 547 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 AXLP30530 894 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 GBP2P32456 591 aaPredicted RBP22.36■■□□□ 1.17
GATC-202ENST00000548171 INF2Q27J81 1249 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 KIAA0319Q5VV43 1072 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 PPP4R3AQ6IN85 833 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 CPLX2Q6PUV4 134 aaKnown RBP22.36■■□□□ 1.17
GATC-202ENST00000548171 RUFY3Q7L099 469 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 OTUD6AQ7L8S5 288 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 FERMT3Q86UX7 667 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 COLGALT2Q8IYK4 626 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 RNF168Q8IYW5 571 aaPredicted RBP22.36■■□□□ 1.17
GATC-202ENST00000548171 RNF149Q8NC42 400 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 ZNF274Q96GC6 653 aaPredicted RBP22.36■■□□□ 1.17
GATC-202ENST00000548171 SEMA4AQ9H3S1 761 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 EPS15L1Q9UBC2 864 aa22.36■■□□□ 1.17
GATC-202ENST00000548171 PRG3Q9Y2Y8 225 aaPredicted RBP22.36■■□□□ 1.17
GATC-202ENST00000548171 CLUHO75153 1309 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 TBX3O15119 743 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 N4BP1O75113 896 aaKnown RBP22.35■■□□□ 1.17
GATC-202ENST00000548171 PAPLNO95428 1278 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 EFEMP2O95967 443 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 GCFC2P16383 781 aaKnown RBP22.35■■□□□ 1.17
GATC-202ENST00000548171 YWHABP31946 246 aaKnown RBP22.35■■□□□ 1.17
GATC-202ENST00000548171 OR1G1P47890 313 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 DSC1Q08554 894 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 NCBP1Q09161 790 aaKnown RBP22.35■■□□□ 1.17
GATC-202ENST00000548171 TOB2Q14106 344 aaPredicted RBP22.35■■□□□ 1.17
GATC-202ENST00000548171 EMC2Q15006 297 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 ZNF579Q8NAF0 562 aaKnown RBP22.35■■□□□ 1.17
GATC-202ENST00000548171 SMG8Q8ND04 991 aaKnown RBP22.35■■□□□ 1.17
GATC-202ENST00000548171 IPPQ9Y573 584 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 VPS13AQ96RL7 3174 aa22.35■■□□□ 1.17
GATC-202ENST00000548171 EP300Q09472 2414 aaPredicted RBP22.34■■□□□ 1.17
GATC-202ENST00000548171 CCDC194A0A1B0GVG4 234 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 ARL5CA6NH57 179 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 DSG1Q02413 1049 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 MXD4Q14582 209 aaPredicted RBP22.34■■□□□ 1.17
GATC-202ENST00000548171 EPHA7Q15375 998 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 NOTUMQ6P988 496 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 NEK8Q86SG6 692 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 GPR65Q8IYL9 337 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 SMG7Q92540 1137 aaKnown RBP22.34■■□□□ 1.17
GATC-202ENST00000548171 NAP1L4Q99733 375 aaKnown RBP22.34■■□□□ 1.17
GATC-202ENST00000548171 LXNQ9BS40 222 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 PLEKHA4Q9H4M7 779 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 WRAP73Q9P2S5 460 aaPredicted RBP22.34■■□□□ 1.17
GATC-202ENST00000548171 ZNF292O60281 2723 aa22.34■■□□□ 1.17
GATC-202ENST00000548171 FANCMQ8IYD8 2048 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 NARSO43776 548 aaKnown RBP22.33■■□□□ 1.17
GATC-202ENST00000548171 CFHP08603 1231 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 SRFP11831 508 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 RFX1P22670 979 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 MLH1P40692 756 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 ID4P47928 161 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 TAS1R1Q7RTX1 841 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 GAD1Q99259 594 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 MTRQ99707 1265 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 COLEC11Q9BWP8 271 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 ZSWIM6Q9HCJ5 1215 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.33■■□□□ 1.17
GATC-202ENST00000548171 CHST7Q9NS84 486 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.33■■□□□ 1.179e-6■□□□□ 8.7
GATC-202ENST00000548171 CYP46A1Q9Y6A2 500 aa22.33■■□□□ 1.17
GATC-202ENST00000548171 STK25O00506 426 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 TSPAN1O60635 241 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 PTENP60484 403 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 POU5F1BQ06416 359 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 TFDP1Q14186 410 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 HACE1Q8IYU2 909 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 SLC44A3Q8N4M1 653 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 CSRNP2Q9H175 543 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 ZSWIM4Q9H7M6 989 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 ZDHHC7Q9NXF8 308 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 CACNA1AO00555 2505 aa22.32■■□□□ 1.16
GATC-202ENST00000548171 ZMYM2Q9UBW7 1377 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 EPB41L2O43491 1005 aaKnown RBP22.31■■□□□ 1.16
GATC-202ENST00000548171 RFPL2O75678 378 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 XKR9Q5GH70 373 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 IFNLR1Q8IU57 520 aaPredicted RBP22.31■■□□□ 1.16
GATC-202ENST00000548171 RSAD2Q8WXG1 361 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 HAS1Q92839 578 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 ZNF707Q96C28 371 aaPredicted RBP22.31■■□□□ 1.16
GATC-202ENST00000548171 AIFM3Q96NN9 605 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 PHF20Q9BVI0 1012 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 EIF2AQ9BY44 585 aaKnown RBP22.31■■□□□ 1.16
GATC-202ENST00000548171 RNF39Q9H2S5 420 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 PIDD1Q9HB75 910 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 BMP2KQ9NSY1 1161 aaPredicted RBP22.31■■□□□ 1.16
GATC-202ENST00000548171 GIT1Q9Y2X7 761 aa22.31■■□□□ 1.16
GATC-202ENST00000548171 KRBA1A5PL33 1030 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms