RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.27e-8■■□□□ 13.7
GCN1-204ENST00000548132 HMGN5P82970 282 aaKnown RBP13.83□□□□□ -0.2
GCN1-204ENST00000548132 MXD4Q14582 209 aaPredicted RBP13.83□□□□□ -0.2
GCN1-204ENST00000548132 IL17AQ16552 155 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 NOTUMQ6P988 496 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 TMC7Q7Z402 723 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 DDX53Q86TM3 631 aaKnown RBP13.83□□□□□ -0.2
GCN1-204ENST00000548132 COLGALT2Q8IYK4 626 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 PHF7Q9BWX1 381 aaPredicted RBP13.83□□□□□ -0.2
GCN1-204ENST00000548132 GBP3Q9H0R5 595 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 CSRNP2Q9H175 543 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 CXCL16Q9H2A7 254 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 DMDP11532 3685 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 MYO10Q9HD67 2058 aa13.83□□□□□ -0.2
GCN1-204ENST00000548132 ANK1P16157 1881 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 MYO15AQ9UKN7 3530 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 CACNA1HO95180 2353 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 ARL5CA6NH57 179 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 INO80B-WBP1J3KQ70 363 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 LILRB3O75022 631 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 ERLIN2O94905 339 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 POMCP01189 267 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
GCN1-204ENST00000548132 RPA1P27694 616 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 SCNN1GP51170 649 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 PCBP1Q15365 356 aaKnown RBP eCLIP13.82□□□□□ -0.2
GCN1-204ENST00000548132 KANK3Q6NY19 840 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 IGSF22Q8N9C0 903 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 SLC22A17Q8WUG5 538 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 ZSCAN31Q96LW9 406 aaPredicted RBP13.82□□□□□ -0.2
GCN1-204ENST00000548132 GAD1Q99259 594 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 KIFC3Q9BVG8 833 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 POMKQ9H5K3 350 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 CACNG4Q9UBN1 327 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 PCDHB6Q9Y5E3 794 aa13.82□□□□□ -0.2
GCN1-204ENST00000548132 PP2D1A8MPX8 630 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 EIF5BO60841 1220 aaKnown RBP13.81□□□□□ -0.2
GCN1-204ENST00000548132 ALADP13716 330 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 AXLP30530 894 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 TRAPPC10P48553 1259 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 ALDH7A1P49419 539 aaKnown RBP13.81□□□□□ -0.2
GCN1-204ENST00000548132 KRT17Q04695 432 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 TFDP1Q14186 410 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 SAFBQ15424 915 aaKnown RBP eCLIP13.81□□□□□ -0.2
GCN1-204ENST00000548132 HFE2Q6ZVN8 426 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 KCNK18Q7Z418 384 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 TMEM175Q9BSA9 504 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 MMTAG2Q9BU76 263 aaKnown RBP13.81□□□□□ -0.2
GCN1-204ENST00000548132 HERC2P3Q9BVR0 1158 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 PDZD7Q9H5P4 517 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 PUF60Q9UHX1 559 aaKnown RBP13.81□□□□□ -0.2
GCN1-204ENST00000548132 USP20Q9Y2K6 914 aa13.81□□□□□ -0.2
GCN1-204ENST00000548132 PRG3Q9Y2Y8 225 aaPredicted RBP13.81□□□□□ -0.2
GCN1-204ENST00000548132 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 A0A1B0GUA9 196 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 LRRIQ4A6NIV6 560 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 NRP1O14786 923 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 NPTXRO95502 500 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 XRCC6P12956 609 aaKnown RBP eCLIP13.8□□□□□ -0.2
GCN1-204ENST00000548132 ITGA4P13612 1032 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 RNASELQ05823 741 aaKnown RBP13.8□□□□□ -0.2
GCN1-204ENST00000548132 RABEP1Q15276 862 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 NAB2Q15742 525 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 MAEAQ7L5Y9 396 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 TAS1R1Q7RTX1 841 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 DAW1Q8N136 415 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 C12orf76Q8N812 135 aaPredicted RBP13.8□□□□□ -0.2
GCN1-204ENST00000548132 MCPH1Q8NEM0 835 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 URGCPQ8TCY9 931 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 CASP10Q92851 521 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 FZD8Q9H461 694 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.8□□□□□ -0.2
GCN1-204ENST00000548132 USP34Q70CQ2 3546 aa13.8□□□□□ -0.2
GCN1-204ENST00000548132 PTGESO14684 152 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 SOD2P04179 222 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 CNPP09543 421 aaKnown RBP13.79□□□□□ -0.2
GCN1-204ENST00000548132 CYP11B2P19099 503 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 SP100P23497 879 aaPredicted RBP13.79□□□□□ -0.2
GCN1-204ENST00000548132 AKAP5P24588 427 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 CLCN4P51793 760 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 MAPK7Q13164 816 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 KIAA1841Q6NSI8 718 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 PADI6Q6TGC4 694 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 LRRC15Q8TF66 581 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 TMX3Q96JJ7 454 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 RPGRIP1Q96KN7 1286 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 CCDC43Q96MW1 224 aaKnown RBP13.79□□□□□ -0.2
GCN1-204ENST00000548132 PAAF1Q9BRP4 392 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 APOL6Q9BWW8 343 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 POLD4Q9HCU8 107 aa13.79□□□□□ -0.2
GCN1-204ENST00000548132 C2CD4DB7Z1M9 353 aa13.78□□□□□ -0.2
GCN1-204ENST00000548132 SSBP05455 408 aaKnown RBP eCLIP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms