RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TCP11Q8WWU5 503 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 RPGRIP1Q96KN7 1286 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 CCDC43Q96MW1 224 aaKnown RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 MTMR9Q96QG7 549 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 POP1Q99575 1024 aaKnown RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 CDCA3Q99618 268 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 TRAIPQ9BWF2 469 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 MRPL9Q9BYD2 267 aaKnown RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 NRDE2Q9H7Z3 1164 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 AGPAT5Q9NUQ2 364 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 TBC1D13Q9NVG8 400 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 MUTYHQ9UIF7 546 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 USP15Q9Y4E8 981 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 PPME1Q9Y570 386 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 MICAL3Q7RTP6 2002 aa7.47□□□□□ -1.21
SCAF11-211ENST00000547950 COL4A4P53420 1690 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-211ENST00000547950 TCF20Q9UGU0 1960 aaKnown RBP7.46□□□□□ -1.21
SCAF11-211ENST00000547950 INO80B-WBP1J3KQ70 363 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 ERLIN2O94905 339 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 POMCP01189 267 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 ALDH2P05091 517 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 GALTP07902 379 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 SRGAP2BP0DMP2 458 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 HOXA11P31270 313 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-211ENST00000547950 RAB27AP51159 221 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 ST3GAL1Q11201 340 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 GNL2Q13823 731 aaKnown RBP7.46□□□□□ -1.22
SCAF11-211ENST00000547950 TFDP1Q14186 410 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 MXD4Q14582 209 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-211ENST00000547950 SMC1AQ14683 1233 aaKnown RBP7.46□□□□□ -1.22
SCAF11-211ENST00000547950 BMS1Q14692 1282 aaKnown RBP7.46□□□□□ -1.22
SCAF11-211ENST00000547950 UBXN11Q5T124 520 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 ANKRD54Q6NXT1 300 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 AGMOQ6ZNB7 445 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 MRPL10Q7Z7H8 261 aaKnown RBP7.46□□□□□ -1.22
SCAF11-211ENST00000547950 ZNF280BQ86YH2 543 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 VPS52Q8N1B4 723 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 FAM184AQ8NB25 1140 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 SMRP1Q8NCR6 262 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 URGCPQ8TCY9 931 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 AUTS2Q8WXX7 1259 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 FAM122AQ96E09 287 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 TMEM169Q96HH4 297 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 C8orf76Q96K31 380 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 FAM193BQ96PV7 902 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-211ENST00000547950 PRKD2Q9BZL6 878 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 TMEM60Q9H2L4 133 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 ANKEF1Q9NU02 776 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 DNAJB4Q9UDY4 337 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 HCN4Q9Y3Q4 1203 aa7.46□□□□□ -1.22
SCAF11-211ENST00000547950 TTC3P53804 2025 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 FSD2A1L4K1 749 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 C2orf71A6NGG8 1288 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 PRR33A8MZF0 331 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 GAS2O43903 313 aaKnown RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 CLASP2O75122 1294 aaKnown RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 DGAT1O75907 488 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 DDHD2O94830 711 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 LYPLA2O95372 231 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 SSBP05455 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 XRCC6P12956 609 aaKnown RBP eCLIP7.45□□□□□ -1.225e-9■□□□□ 8.2
SCAF11-211ENST00000547950 ITGA4P13612 1032 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 GLRA2P23416 452 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 SP100P23497 879 aaPredicted RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 ARL2P36404 184 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 SLC11A1P49279 550 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 RBM25P49756 843 aaKnown RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 RARRES1P49788 294 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 PTENP60484 403 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 PTGDRQ13258 359 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 KCNC3Q14003 757 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 SYCE2Q6PIF2 218 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 TMEM184AQ6ZMB5 413 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 DDX53Q86TM3 631 aaKnown RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 TMEM173Q86WV6 379 aaPredicted RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 CATSPER3Q86XQ3 398 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 ASAP3Q8TDY4 903 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 IGSF21Q96ID5 467 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 CPB2Q96IY4 423 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 ZSCAN31Q96LW9 406 aaPredicted RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 LLPHQ9BRT6 129 aaKnown RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 APOL6Q9BWW8 343 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 PHF7Q9BWX1 381 aaPredicted RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 EIF2AQ9BY44 585 aaKnown RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 S1PR5Q9H228 398 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 RSAD1Q9HA92 442 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 XPNPEP1Q9NQW7 623 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.45□□□□□ -1.22
SCAF11-211ENST00000547950 KANSL3Q9P2N6 904 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 FAN1Q9Y2M0 1017 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 HES2Q9Y543 173 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 HCFC2Q9Y5Z7 792 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 MUC3AQ02505 3323 aa7.45□□□□□ -1.22
SCAF11-211ENST00000547950 KAT6AQ92794 2004 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 SIP14410 1827 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 LOC730098B7Z3J9 87 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 NRP1O14786 923 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 B4GALT3O60512 393 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 GFRA3O60609 400 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms