RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 APEX2Q9UBZ4 518 aa14.6□□□□□ -0.07
PTCH1-215ENST00000547672 A6NJR5 290 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 FAM155AB1AL88 458 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-215ENST00000547672 TOM1L1O75674 476 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 TOMM70O94826 608 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 INSRRP14616 1297 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 SMPD1P17405 629 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 KLRC1P26715 233 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 ADSSP30520 456 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 EIF4A3P38919 411 aaKnown RBP14.59□□□□□ -0.07
PTCH1-215ENST00000547672 MXI1P50539 228 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 SOX10P56693 466 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 CYP24A1Q07973 514 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 GRM1Q13255 1194 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 RAPGEF1Q13905 1077 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 CAPSQ13938 189 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 MTF1Q14872 753 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 PSMD6Q15008 389 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 PCBP1Q15365 356 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTCH1-215ENST00000547672 TDRD12Q587J7 1177 aaKnown RBP14.59□□□□□ -0.07
PTCH1-215ENST00000547672 MFSD14CQ5VZR4 134 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 SYT10Q6XYQ8 523 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 CCDC155Q8N6L0 562 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 METTL13Q8N6R0 699 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 DESI2Q9BSY9 194 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 MSTO1Q9BUK6 570 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 KATNAL1Q9BW62 490 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 PRMT7Q9NVM4 692 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-215ENST00000547672 DNAI1Q9UI46 699 aa14.59□□□□□ -0.07
PTCH1-215ENST00000547672 MCM3APO60318 1980 aa14.58□□□□□ -0.07
PTCH1-215ENST00000547672 A0A0B4J269 797 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 ACKR2O00590 384 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 ZEB2O60315 1214 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 MMP3P08254 477 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 SRGAP2CP0DJJ0 459 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 GNAT1P11488 350 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 PRKCIP41743 596 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 KIF11P52732 1056 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 VAV2P52735 878 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 MFAP3P55082 362 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 CCDC122Q5T0U0 273 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 IFNLR1Q8IU57 520 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-215ENST00000547672 RNF149Q8NC42 400 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 MYRIPQ8NFW9 859 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 FAM213AQ9BRX8 229 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 C16orf70Q9BSU1 422 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 TCHPQ9BT92 498 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 KIFC3Q9BVG8 833 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 IFIH1Q9BYX4 1025 aaKnown RBP14.58□□□□□ -0.08
PTCH1-215ENST00000547672 RNPEPQ9H4A4 650 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 LZTFL1Q9NQ48 299 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 COQ4Q9Y3A0 265 aa14.58□□□□□ -0.08
PTCH1-215ENST00000547672 ZBTB42B2RXF5 422 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 RBAK-RBAKDNI3L0D1 243 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 EPHB6O15197 1021 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 DYNC1LI2O43237 492 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-215ENST00000547672 C22orf31O95567 290 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 PRKCBP05771 671 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 HOXD10P28358 340 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 SOX5P35711 763 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 MAGEA1P43355 309 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 PTENP60484 403 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 C1QTNF8P60827 252 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 CLDN10P78369 228 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 PPFIA1Q13136 1202 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 CRHR2Q13324 411 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 ARHGEF6Q15052 776 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 SLC18A3Q16572 532 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 IFI16Q16666 785 aaKnown RBP14.57□□□□□ -0.08
PTCH1-215ENST00000547672 FAM187BQ17R55 369 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 TMEM132AQ24JP5 1023 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 WDR44Q5JSH3 913 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 PAXIP1Q6ZW49 1069 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-215ENST00000547672 TRIM50Q86XT4 487 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 RHPN2Q8IUC4 686 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 RNF10Q8N5U6 811 aaKnown RBP14.57□□□□□ -0.08
PTCH1-215ENST00000547672 FBXL13Q8NEE6 735 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 UBE2Q2Q8WVN8 375 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 JAKMIP2Q96AA8 810 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 CALR3Q96L12 384 aaKnown RBP14.57□□□□□ -0.08
PTCH1-215ENST00000547672 INO80BQ9C086 356 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-215ENST00000547672 SPC25Q9HBM1 224 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 ARHGAP20Q9P2F6 1191 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 DNAJC12Q9UKB3 198 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 GJD2Q9UKL4 321 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 PCDHA13Q9Y5I0 950 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 ATP8B3O60423 1300 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 ADGRA3Q8IWK6 1321 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 NRCAMQ92823 1304 aa14.57□□□□□ -0.08
PTCH1-215ENST00000547672 CTAGE9A4FU28 777 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 GOLGA8IPA6NC78 632 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 GOLGA8JA6NMD2 632 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 OGTO15294 1046 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 RPLP2P05387 115 aaKnown RBP14.56□□□□□ -0.08
PTCH1-215ENST00000547672 TRIM49P0CI25 452 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 TRIM49CP0CI26 452 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 CYP2B6P20813 491 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 GPC3P51654 580 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 JAM2P57087 298 aa14.56□□□□□ -0.08
PTCH1-215ENST00000547672 PRPF4BQ13523 1007 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms