RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ITGB1P05556 798 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 MAPTP10636 758 aaKnown RBP12.05□□□□□ -0.48
GCN1-202ENST00000547263 LAG3P18627 525 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 CTNNB1P35222 781 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 AFF1P51825 1210 aaKnown RBP12.05□□□□□ -0.48
GCN1-202ENST00000547263 DSC1Q08554 894 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 NOMO2Q5JPE7 1267 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 RRAGBQ5VZM2 374 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 EEF1DP3Q658K8 133 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 SLC39A11Q8N1S5 342 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 HELQQ8TDG4 1101 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 LPPQ93052 612 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 ACO2Q99798 780 aaKnown RBP12.05□□□□□ -0.48
GCN1-202ENST00000547263 STRA6Q9BX79 667 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 RNF39Q9H2S5 420 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 RSAD1Q9HA92 442 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 TBC1D13Q9NVG8 400 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 KBTBD4Q9NVX7 518 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 LARSQ9P2J5 1176 aaKnown RBP12.05□□□□□ -0.48
GCN1-202ENST00000547263 MTUS1Q9ULD2 1270 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 PCDHA7Q9UN72 937 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 GIT1Q9Y2X7 761 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
GCN1-202ENST00000547263 NPHP3-ACAD11A0A0J9YXS1 232 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 MYMKA6NI61 221 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 SFI1A8K8P3 1242 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 K7ERI5 159 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 DNAJB1P25685 340 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 TXLNAP40222 546 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 NCBP1Q09161 790 aaKnown RBP12.04□□□□□ -0.48
GCN1-202ENST00000547263 PRPF4BQ13523 1007 aaKnown RBP12.04□□□□□ -0.48
GCN1-202ENST00000547263 ZRSR1Q15695 479 aaKnown RBP12.04□□□□□ -0.48
GCN1-202ENST00000547263 XKR4Q5GH76 650 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 FOXD4L5Q5VV16 416 aaPredicted RBP12.04□□□□□ -0.48
GCN1-202ENST00000547263 RESP18Q5W5W9 173 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 KCNT2Q6UVM3 1135 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 GLB1LQ6UWU2 654 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 ZPBP2Q6X784 338 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 LEO1Q8WVC0 666 aaPredicted RBP12.04□□□□□ -0.48
GCN1-202ENST00000547263 FOXD4L4Q8WXT5 416 aaPredicted RBP12.04□□□□□ -0.48
GCN1-202ENST00000547263 CUEDC2Q9H467 287 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 NXF3Q9H4D5 531 aaKnown RBP12.04□□□□□ -0.48
GCN1-202ENST00000547263 NRDE2Q9H7Z3 1164 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 KMT5AQ9NQR1 393 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 EYSQ5T1H1 3165 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 REV3LO60673 3130 aa12.04□□□□□ -0.48
GCN1-202ENST00000547263 CITO14578 2027 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 H0YCG3 227 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 FSCN2O14926 492 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 SLC16A4O15374 487 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
GCN1-202ENST00000547263 DDHD2O94830 711 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 ITGA4P13612 1032 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 PPM1AP35813 382 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 GTF2BQ00403 316 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 NAB2Q15742 525 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 DCAF4L1Q3SXM0 396 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 TIGD5Q53EQ6 642 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 ATF7IP2Q5U623 682 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 HAUS6Q7Z4H7 955 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 CDR2LQ86X02 465 aaPredicted RBP12.03□□□□□ -0.48
GCN1-202ENST00000547263 RNF168Q8IYW5 571 aaPredicted RBP12.03□□□□□ -0.48
GCN1-202ENST00000547263 ABI1Q8IZP0 508 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 DDX12PQ92771 950 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 TMEM175Q9BSA9 504 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 TNMDQ9H2S6 317 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 AAASQ9NRG9 546 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 OLFML3Q9NRN5 406 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 MIOSQ9NXC5 875 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 KANSL3Q9P2N6 904 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 SEL1LQ9UBV2 794 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 HPSEQ9Y251 543 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 USP20Q9Y2K6 914 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 HES2Q9Y543 173 aa12.03□□□□□ -0.48
GCN1-202ENST00000547263 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.02□□□□□ -0.49
GCN1-202ENST00000547263 ARL5CA6NH57 179 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 PTGESO14684 152 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 TRAK2O60296 914 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 FGF18O76093 207 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 NPTXRO95502 500 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 SSBP05455 408 aaKnown RBP eCLIP12.02□□□□□ -0.49
GCN1-202ENST00000547263 GALTP07902 379 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 IGFBP4P22692 258 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 SMTNP53814 917 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 BCAR1P56945 870 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 KRT85P78386 507 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.49
GCN1-202ENST00000547263 EHHADHQ08426 723 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 RAD51AP2Q09MP3 1159 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 PTPROQ16827 1216 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 CTC1Q2NKJ3 1217 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 ADALQ6DHV7 355 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 SV2BQ7L1I2 683 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 ZNF280BQ86YH2 543 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 COLGALT2Q8IYK4 626 aa12.02□□□□□ -0.49
GCN1-202ENST00000547263 SLC17A8Q8NDX2 589 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms