RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 MCPH1Q8NEM0 835 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 BSNDQ8WZ55 320 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 CCDC51Q96ER9 411 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 IGSF21Q96ID5 467 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
BEST3-208ENST00000547208 CSRNP2Q9H175 543 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
BEST3-208ENST00000547208 NOL7Q9UMY1 257 aaKnown RBP11.44□□□□□ -0.58
BEST3-208ENST00000547208 IPPQ9Y573 584 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 VWA8A3KMH1 1905 aa11.44□□□□□ -0.58
BEST3-208ENST00000547208 CITO14578 2027 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 FSD2A1L4K1 749 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 TTLL13PA6NNM8 815 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 EDN1P05305 212 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 CYP11B2P19099 503 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 SSTR3P32745 418 aaPredicted RBP11.43□□□□□ -0.58
BEST3-208ENST00000547208 MRE11P49959 708 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 GNL2Q13823 731 aaKnown RBP11.43□□□□□ -0.58
BEST3-208ENST00000547208 PDIA5Q14554 519 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 SMC1AQ14683 1233 aaKnown RBP11.43□□□□□ -0.58
BEST3-208ENST00000547208 HAUS3Q68CZ6 603 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 SYCE2Q6PIF2 218 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 PADI6Q6TGC4 694 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 TMC7Q7Z402 723 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 CNNM3Q8NE01 707 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 SUSD6Q92537 303 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 TMEM169Q96HH4 297 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 MMTAG2Q9BU76 263 aaKnown RBP11.43□□□□□ -0.58
BEST3-208ENST00000547208 CCDC113Q9H0I3 377 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 ZBP1Q9H171 429 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 S1PR5Q9H228 398 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 FZD8Q9H461 694 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 MIOSQ9NXC5 875 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 USP15Q9Y4E8 981 aaPredicted RBP11.43□□□□□ -0.58
BEST3-208ENST00000547208 HES2Q9Y543 173 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 IRAK3Q9Y616 596 aa11.43□□□□□ -0.58
BEST3-208ENST00000547208 A0A1B0GUA9 196 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 CARNS1A5YM72 827 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 ARL5CA6NH57 179 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 LRRIQ4A6NIV6 560 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 PP2D1A8MPX8 630 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 LAD1O00515 517 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 EFEMP2O95967 443 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 POMCP01189 267 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 ITGA4P13612 1032 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 GJB2P29033 226 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 CCT6AP40227 531 aaKnown RBP11.42□□□□□ -0.58
BEST3-208ENST00000547208 MLH1P40692 756 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 PRPHP41219 470 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 RNASELQ05823 741 aaKnown RBP11.42□□□□□ -0.58
BEST3-208ENST00000547208 DSC1Q08554 894 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 FAM187BQ17R55 369 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 ANKRD54Q6NXT1 300 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 DDX53Q86TM3 631 aaKnown RBP11.42□□□□□ -0.58
BEST3-208ENST00000547208 CDR2LQ86X02 465 aaPredicted RBP11.42□□□□□ -0.58
BEST3-208ENST00000547208 COLGALT2Q8IYK4 626 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 VPS52Q8N1B4 723 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 GSTCDQ8NEC7 633 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 URGCPQ8TCY9 931 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 FAM212AQ96EL1 285 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 FBXL18Q96ME1 805 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 ZFP42Q96MM3 310 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 GAD1Q99259 594 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 TMEM175Q9BSA9 504 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 GBP3Q9H0R5 595 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 NXF3Q9H4D5 531 aaKnown RBP11.42□□□□□ -0.58
BEST3-208ENST00000547208 UBN1Q9NPG3 1134 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 MARCH5Q9NX47 278 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 KANSL3Q9P2N6 904 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 LRWD1Q9UFC0 647 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
BEST3-208ENST00000547208 HCFC2Q9Y5Z7 792 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 TECTAO75443 2155 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 MYO10Q9HD67 2058 aa11.42□□□□□ -0.58
BEST3-208ENST00000547208 ARHGEF35A5YM69 484 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 CLASP2O75122 1294 aaKnown RBP11.41□□□□□ -0.58
BEST3-208ENST00000547208 CTSAP10619 480 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 CDC25AP30304 524 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 MCM2P49736 904 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 ATP2C1P98194 919 aaPredicted RBP11.41□□□□□ -0.58
BEST3-208ENST00000547208 NHLH1Q02575 133 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 LLGL2Q6P1M3 1020 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 SLC27A1Q6PCB7 646 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 RNF168Q8IYW5 571 aaPredicted RBP11.41□□□□□ -0.58
BEST3-208ENST00000547208 AUTS2Q8WXX7 1259 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 PRIMPOLQ96LW4 560 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 BHMT2Q9H2M3 363 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 UPF2Q9HAU5 1272 aaKnown RBP11.41□□□□□ -0.58
BEST3-208ENST00000547208 DDX19AQ9NUU7 478 aaKnown RBP11.41□□□□□ -0.58
BEST3-208ENST00000547208 PRMT7Q9NVM4 692 aaPredicted RBP11.41□□□□□ -0.58
BEST3-208ENST00000547208 KIAA1024Q9UPX6 916 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 USP34Q70CQ2 3546 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 ZMYM2Q9UBW7 1377 aa11.41□□□□□ -0.58
BEST3-208ENST00000547208 E9PMD0 336 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 F8W810 466 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 NRP1O14786 923 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 LILRB3O75022 631 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 NPTXRO95502 500 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms