RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FRMD4BQ9Y2L6 1034 aa17.32■□□□□ 0.36
TRAFD1-203ENST00000547063 N4BP3O15049 544 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 GPR182O15218 404 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 CLIC2O15247 247 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 SLC16A3O15427 465 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 CLDN3O15551 220 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 PARNO95453 639 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 CHRNA1P02708 482 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 CTSHP09668 335 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 EEF1GP26641 437 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 MATR3P43243 847 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 MRE11P49959 708 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 MGAT3Q09327 533 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 CDKAL1Q5VV42 579 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 LRRC55Q6ZSA7 311 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 XXYLT1Q8NBI6 393 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 WNT8BQ93098 351 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 ADPGKQ9BRR6 497 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 TCHPQ9BT92 498 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 CDHR5Q9HBB8 845 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 METTL14Q9HCE5 456 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
TRAFD1-203ENST00000547063 ANKRD63C9JTQ0 380 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 MAPK13O15264 365 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 TSPAN1O60635 241 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 EXOC3O60645 756 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 RPS6KA5O75582 802 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 TPM2P07951 284 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 EPB41P11171 864 aaKnown RBP17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 SELPP16109 830 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 ZNF18P17022 549 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 PSMC2P35998 433 aaKnown RBP17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 TLE2Q04725 743 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 AMHR2Q16671 573 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 KYAT1Q16773 422 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 TRIM60Q495X7 471 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 ZNF618Q5T7W0 954 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 MPZL3Q6UWV2 235 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 CCDC51Q96ER9 411 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 HSPBP1Q9NZL4 362 aa17.3■□□□□ 0.36
TRAFD1-203ENST00000547063 A0A0B4J269 797 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 A0A1B0GUA9 196 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 IQCF3P0C7M6 154 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 ARF4P18085 180 aaPredicted RBP17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 CYP2J2P51589 502 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 MCL1Q07820 350 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 NOLC1Q14978 699 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 ZNF568Q3ZCX4 644 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 CCDC40Q4G0X9 1142 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 FBXO47Q5MNV8 452 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 SLC39A4Q6P5W5 647 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 LRRC8DQ7L1W4 858 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 USP37Q86T82 979 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 GPD1LQ8N335 351 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 TMEM40Q8WWA1 233 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 CBWD1Q9BRT8 395 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 MSTO1Q9BUK6 570 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 CHST12Q9NRB3 414 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 AGPAT5Q9NUQ2 364 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 ANKFY1Q9P2R3 1169 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 AGO2Q9UKV8 859 aaKnown RBP17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 ATP11BQ9Y2G3 1177 aa17.29■□□□□ 0.36
TRAFD1-203ENST00000547063 KCNJ18B7U540 433 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 B4GALT5O43286 388 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 EXTL3O43909 919 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 CSDE1O75534 798 aaKnown RBP17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 CLTBP09497 229 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 MCF2P10911 925 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 PRKCSHP14314 528 aaPredicted RBP17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 PROZP22891 400 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 ADSSP30520 456 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 MARSP56192 900 aaKnown RBP17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 PPP2R3AQ06190 1150 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 KCNJ12Q14500 433 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 DCAF4L1Q3SXM0 396 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 TCP11X2Q5H9J9 407 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 CEP135Q66GS9 1140 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 SLC27A1Q6PCB7 646 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 CNOT6LQ96LI5 555 aaKnown RBP17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 HSD3B7Q9H2F3 369 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 IKZF4Q9H2S9 585 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 HIPK3Q9H422 1215 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 PCIF1Q9H4Z3 704 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 PTPRHQ9HD43 1115 aa17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 ARMCX3Q9UH62 379 aaPredicted RBP17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 NOC2LQ9Y3T9 749 aaKnown RBP17.28■□□□□ 0.36
TRAFD1-203ENST00000547063 TISP43B9A030 160 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 OGTO15294 1046 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 SERPINC1P01008 464 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 TPM3P06753 285 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 KRT13P13646 458 aa17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 EN2P19622 333 aaPredicted RBP17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 MTIF2P46199 727 aaKnown RBP17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 POU5F1Q01860 360 aaKnown RBP17.27■□□□□ 0.36
TRAFD1-203ENST00000547063 PAK2Q13177 524 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms