RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 VWA3AA6NCI4 1184 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 PPFIA4O75335 1185 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 CABYRO75952 493 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 COL6A1P12109 1028 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 EN2P19622 333 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-211ENST00000546304 MARK3P27448 753 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 TECP42680 631 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 PRKCEQ02156 737 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 MLLT1Q03111 559 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-211ENST00000546304 STK38Q15208 465 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 UGCGQ16739 394 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 UTP14CQ5TAP6 766 aaKnown RBP7.09□□□□□ -1.27
PRKDC-211ENST00000546304 FAM160B1Q5W0V3 765 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 HAUS3Q68CZ6 603 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 ABHD15Q6UXT9 468 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 NECAB2Q7Z6G3 386 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 UBE2Q1Q7Z7E8 422 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 IGSF22Q8N9C0 903 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 NEK9Q8TD19 979 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 KCNG4Q8TDN1 519 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 AFAP1L1Q8TED9 768 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 KAT2BQ92831 832 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 GLG1Q92896 1179 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 ATP6V0A1Q93050 837 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 FERMT2Q96AC1 680 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 PAWRQ96IZ0 340 aaKnown RBP7.09□□□□□ -1.27
PRKDC-211ENST00000546304 CHAMP1Q96JM3 812 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 PCYT2Q99447 389 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 LXNQ9BS40 222 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 C16orf70Q9BSU1 422 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 RAB34Q9BZG1 259 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 C11orf49Q9H6J7 331 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 STARD7Q9NQZ5 370 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 ZNF302Q9NR11 478 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 ERAP1Q9NZ08 941 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 PCDHA10Q9Y5I2 948 aa7.09□□□□□ -1.27
PRKDC-211ENST00000546304 A0A0U1RQG5 324 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-211ENST00000546304 PP2D1A8MPX8 630 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 H3BRB1 525 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 HAS3O00219 553 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 SPTLC2O15270 562 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 MARCKSP29966 332 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-211ENST00000546304 SCNN1AP37088 669 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 SLC26A2P50443 739 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 STAT5BP51692 787 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 CHMP4BP1P59074 171 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 PSMC6P62333 389 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 CYP4A11Q02928 519 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 SNX17Q15036 470 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 SLC39A14Q15043 492 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 IL17AQ16552 155 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 KIAA0753Q2KHM9 967 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 ELMSAN1Q6PJG2 1045 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 PLPPR4Q7Z2D5 763 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 CKAP2LQ8IYA6 745 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 LINC00301Q8NCQ3 95 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 OR13H1Q8NG92 308 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 ERMNQ8TAM6 284 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 GPR152Q8TDT2 470 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 SNX29Q8TEQ0 813 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 ATP8B4Q8TF62 1192 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 FAM167AQ96KS9 214 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 AK8Q96MA6 479 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 SMARCAD1Q9H4L7 1026 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 TUT1Q9H6E5 874 aaKnown RBP7.08□□□□□ -1.28
PRKDC-211ENST00000546304 GABBR1Q9UBS5 961 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 LRWD1Q9UFC0 647 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 FBXO2Q9UK22 296 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-211ENST00000546304 CFAP45Q9UL16 551 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 LAMA3Q16787 3333 aa7.08□□□□□ -1.28
PRKDC-211ENST00000546304 GRIN2DO15399 1336 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 MROH7Q68CQ1 1323 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 KDM3AQ9Y4C1 1321 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 A0A0A0MRY4 1105 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 ZNF862O60290 1169 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 DKC1O60832 514 aaKnown RBP eCLIP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 PPP6R2O75170 966 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 P4HBP07237 508 aaKnown RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 SMIM10L2AP0DMW4 78 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 SMIM10L2BP0DMW5 78 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 NPR3P17342 541 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 HOXC8P31273 242 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 LONP1P36776 959 aaKnown RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 QARSP47897 775 aaKnown RBP7.07□□□□□ -1.28
PRKDC-211ENST00000546304 ME1P48163 572 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 PSMC5P62195 406 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 GRIN1Q05586 938 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 PPFIA1Q13136 1202 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 ITGA7Q13683 1181 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 PLCB4Q15147 1175 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 EPHA7Q15375 998 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 FAM47CQ5HY64 1035 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 KRT79Q5XKE5 535 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 SWSAP1Q6NVH7 229 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 NFRKBQ6P4R8 1299 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 SESTD1Q86VW0 696 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 DTWD1Q8N5C7 304 aa7.07□□□□□ -1.28
PRKDC-211ENST00000546304 LEO1Q8WVC0 666 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms