RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	ZBED1	O96006	694 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	ZBTB48	P10074	688 aa	Predicted RBP	4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	VAV1	P15498	845 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	C5AR1	P21730	350 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	BDNF	P23560	247 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	BMP8B	P34820	402 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	ECE1	P42892	770 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	MTHFS	P49914	203 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	LACTB	P83111	547 aa	Predicted RBP	4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	SRSF2	Q01130	221 aa	Known RBP	4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	ADGRF1	Q5T601	910 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	EEF1DP3	Q658K8	133 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	RCSD1	Q6JBY9	416 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	FSTL4	Q6MZW2	842 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	SRGAP1	Q7Z6B7	1085 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	NME9	Q86XW9	330 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	CPNE8	Q86YQ8	564 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	TEX2	Q8IWB9	1127 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	GRAMD1C	Q8IYS0	662 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	FAM43A	Q8N2R8	423 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	ZNF610	Q8N9Z0	462 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	MARCH10	Q8NA82	808 aa	Predicted RBP	4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	PPP1R35	Q8TAP8	253 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	DIS3L	Q8TF46	1054 aa	Known RBP	4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	POF1B	Q8WVV4	589 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	HPS3	Q969F9	1004 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	TCTN2	Q96GX1	697 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	TMEM169	Q96HH4	297 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	KCNC2	Q96PR1	638 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	FAM193B	Q96PV7	902 aa	Predicted RBP	4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	MMP19	Q99542	508 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	KRTAP9-3	Q9BYQ3	159 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	PCIF1	Q9H4Z3	704 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	FAM204A	Q9H8W3	233 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	SP110	Q9HB58	689 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	SMURF1	Q9HCE7	757 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	MAP3K20	Q9NYL2	800 aa	Known RBP	4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	IPP	Q9Y573	584 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	PCDHGB6	Q9Y5F9	930 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	PPP2R3B	Q9Y5P8	575 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	KIF24	Q5T7B8	1368 aa		4.22	□□□□□ -1.73
CUL3-215	ENST00000546102	MAPK8IP3	Q9UPT6	1336 aa		4.21	□□□□□ -1.73
CUL3-215	ENST00000546102	ABCC6	O95255	1503 aa		4.21	□□□□□ -1.73
CUL3-215	ENST00000546102	PHRF1	Q9P1Y6	1649 aa	Known RBP	4.21	□□□□□ -1.73
CUL3-215	ENST00000546102	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.21	□□□□□ -1.73
CUL3-215	ENST00000546102		A0A0G2JLL6	359 aa	Predicted RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SSU72P8	A0A1W2PR75	194 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	AMY2A	P04746	511 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	POU2F2	P09086	479 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	OSM	P13725	252 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	ZKSCAN1	P17029	563 aa	Predicted RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	AMY2B	P19961	511 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	PTX3	P26022	381 aa	Predicted RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	BCL6	P41182	706 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	FXR1	P51114	621 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	KIF11	P52732	1056 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SRSF3	P84103	164 aa	Known RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	LSAMP	Q13449	338 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	LAPTM5	Q13571	262 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SLC14A2	Q15849	920 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	ALF	Q53S48	1182 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	TOR2A	Q5JU69	321 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	RTP2	Q5QGT7	225 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	ATAT1	Q5SQI0	421 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	CCDC70	Q6NSX1	233 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	OVCH2	Q7RTZ1	564 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	PTRH1	Q86Y79	214 aa	Known RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	ZNF655	Q8N720	491 aa	Predicted RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	DAGLB	Q8NCG7	672 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SIGLEC10	Q96LC7	697 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SLC2A13	Q96QE2	648 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	MAP3K14	Q99558	947 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	APOL5	Q9BWW9	433 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	JAM3	Q9BX67	310 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SGPP1	Q9BX95	441 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	QRSL1	Q9H0R6	528 aa	Known RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SMOC1	Q9H4F8	434 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	ZMAT4	Q9H898	229 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	BTG4	Q9NY30	223 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	CLDND1	Q9NY35	253 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	GTF2A1L	Q9UNN4	478 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	JAG2	Q9Y219	1238 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	GPR45	Q9Y5Y3	372 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SBNO1	A3KN83	1393 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	FLT4	P35916	1363 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	PNPLA6	Q8IY17	1366 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	MED1	Q15648	1581 aa	Predicted RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	XIRP1	Q702N8	1843 aa	Known RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	MARF1	Q9Y4F3	1742 aa	Known RBP	4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	SLIT3	O75094	1523 aa		4.21	□□□□□ -1.74
CUL3-215	ENST00000546102	LTN1	O94822	1766 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	ALS2	Q96Q42	1657 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	ARHGEF10	O15013	1369 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	TRBV23OR9-2	A0A075B6M9	112 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	SCD	O00767	359 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	SLC26A4	O43511	780 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	HIP1R	O75146	1068 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	ZNF205	O95201	554 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	SYP	P08247	313 aa		4.2	□□□□□ -1.74
CUL3-215	ENST00000546102	CELA3B	P08861	270 aa		4.2	□□□□□ -1.74

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