RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 GGCXP38435 758 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 PSMC5P62195 406 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 CCDC137Q6PK04 289 aaKnown RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 CYB5R4Q7L1T6 521 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 GUF1Q8N442 669 aaKnown RBP12.42□□□□□ -0.42
CIT-217ENST00000545913 MMP19Q99542 508 aa12.42□□□□□ -0.42
CIT-217ENST00000545913 GMNCA6NCL1 334 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 EDEM3Q9BZQ6 932 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 POLR3FQ9H1D9 316 aaPredicted RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 VPS11Q9H270 941 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 RPS6KA4O75676 772 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 MAGEA9P43362 315 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 POLE2P56282 527 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 OCA2Q04671 838 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 MKRN3Q13064 507 aaKnown RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 CDKL3Q8IVW4 592 aaPredicted RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 DDX50Q9BQ39 737 aaKnown RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 C21orf2O43822 256 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 SYF2O95926 243 aaKnown RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 KCNA1Q09470 495 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 ICA1LQ8NDH6 482 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 TTC7AQ9ULT0 858 aaPredicted RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 SRGAP2O75044 1071 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 TTC23LQ6PF05 361 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 TBC1D1Q86TI0 1168 aaPredicted RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 TEX2Q8IWB9 1127 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 FMR1NBQ8N0W7 255 aaPredicted RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 GRAMD1AQ96CP6 724 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 EIF2AK1Q9BQI3 630 aaKnown RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 OSBPL5Q9H0X9 879 aaPredicted RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 NEUROG2Q9H2A3 272 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 DCP1AQ9NPI6 582 aaPredicted RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 SENP1Q9P0U3 644 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 FAM95CA0A1B0GW59 222 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 PI4K2BG5E9Z4 385 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 FAM102AQ5T9C2 384 aaPredicted RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 SPATA33Q96N06 139 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 SNX5Q9Y5X3 404 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 MYO1DO94832 1006 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 SH3TC2Q8TF17 1288 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 MAP3K20Q9NYL2 800 aaKnown RBP12.41□□□□□ -0.42
CIT-217ENST00000545913 GABBR1Q9UBS5 961 aa12.41□□□□□ -0.42
CIT-217ENST00000545913 A0A1W2PQC6 194 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 TARSL2A2RTX5 802 aaKnown RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 APOL1O14791 398 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 PRDX5P30044 214 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 KCNQ4P56696 695 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 POU5F1BQ06416 359 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 HIF1AQ16665 826 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 GPD1LQ8N335 351 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 DYDC2Q96IM9 177 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 TUFT1Q9NNX1 390 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 BCAR1P56945 870 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 FBXW4P57775 412 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 MAP3K10Q02779 954 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 HIPK4Q8NE63 616 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 ZNF526Q8TF50 670 aaPredicted RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 CD209Q9NNX6 404 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 OTUB1Q96FW1 271 aaPredicted RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 TSC22D3Q99576 134 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 COG4Q9H9E3 785 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 ADAM21Q9UKJ8 722 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 HOXD10P28358 340 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 LRRC23Q53EV4 343 aaPredicted RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 C11orf70Q9BRQ4 267 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 JPH1Q9HDC5 661 aaPredicted RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 RNF146Q9NTX7 359 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 ADA2Q9NZK5 511 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 BFARQ9NZS9 450 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 CCDC22O60826 627 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 ATP2C1P98194 919 aaPredicted RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 NME3Q13232 169 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 C16orf87Q6PH81 154 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 SYDE1Q6ZW31 735 aaPredicted RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 RFFLQ8WZ73 363 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 TULP4Q9NRJ4 1543 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 DNAJC6O75061 913 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 MAPRE2Q15555 327 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 FAM47EQ6ZV65 393 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 NUDCD3Q8IVD9 361 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 NAF1Q96HR8 494 aaKnown RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 ZNF560Q96MR9 790 aa12.4□□□□□ -0.42
CIT-217ENST00000545913 CHCHD3Q9NX63 227 aaKnown RBP12.4□□□□□ -0.42
CIT-217ENST00000545913 ATXN8OSP0DMR3 200 aa12.4□□□□□ -0.43
CIT-217ENST00000545913 TADA2BQ86TJ2 420 aa12.4□□□□□ -0.43
CIT-217ENST00000545913 ABTB1Q969K4 478 aaPredicted RBP12.4□□□□□ -0.43
CIT-217ENST00000545913 RMDN2Q96LZ7 410 aa12.4□□□□□ -0.43
CIT-217ENST00000545913 ACAD9Q9H845 621 aa12.4□□□□□ -0.43
CIT-217ENST00000545913 SARS2Q9NP81 518 aaKnown RBP12.4□□□□□ -0.43
CIT-217ENST00000545913 CDV3Q9UKY7 258 aaKnown RBP12.4□□□□□ -0.43
CIT-217ENST00000545913 ADGRB3O60242 1522 aa12.39□□□□□ -0.43
CIT-217ENST00000545913 SLC26A4O43511 780 aa12.39□□□□□ -0.43
CIT-217ENST00000545913 EFNA5P52803 228 aa12.39□□□□□ -0.43
CIT-217ENST00000545913 PDCLQ13371 301 aa12.39□□□□□ -0.43
CIT-217ENST00000545913 FLOT2Q14254 428 aa12.39□□□□□ -0.43
CIT-217ENST00000545913 RARS2Q5T160 578 aaKnown RBP12.39□□□□□ -0.43
CIT-217ENST00000545913 NFRKBQ6P4R8 1299 aa12.39□□□□□ -0.43
CIT-217ENST00000545913 PPM1NQ8N819 430 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms