RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 ZNF280AP59817 542 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 SLC6A3Q01959 620 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 ALDH6A1Q02252 535 aaKnown RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 DBPQ10586 325 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 DHX8Q14562 1220 aaKnown RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 LLGL1Q15334 1064 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 UAP1L1Q3KQV9 507 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 LONRF3Q496Y0 759 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 MBNL2Q5VZF2 373 aaKnown RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 KIAA1841Q6NSI8 718 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 TIGD7Q6NT04 549 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 USP45Q70EL2 814 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 MORC1Q86VD1 984 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 ZC3H18Q86VM9 953 aaKnown RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 TXNDC5Q8NBS9 432 aaKnown RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 CHST13Q8NET6 341 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 PARD3BQ8TEW8 1205 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 E2F7Q96AV8 911 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 MVB12AQ96EY5 273 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 FAM193BQ96PV7 902 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 MAP3K14Q99558 947 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 FOXB1Q99853 325 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 NAA15Q9BXJ9 866 aaKnown RBP5.16□□□□□ -1.58
SNHG1-222ENST00000545308 WNT8AQ9H1J5 351 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 IFT122Q9HBG6 1241 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 UCKL1Q9NWZ5 548 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 SRRDQ9UH36 339 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 INTUQ9ULD6 942 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 PHTF1Q9UMS5 762 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 LIMCH1Q9UPQ0 1083 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 DAAM1Q9Y4D1 1078 aa5.16□□□□□ -1.58
SNHG1-222ENST00000545308 SYNJ2O15056 1496 aa5.15□□□□□ -1.58
SNHG1-222ENST00000545308 GRIN2BQ13224 1484 aa5.15□□□□□ -1.58
SNHG1-222ENST00000545308 DDX3XO00571 662 aaKnown RBP eCLIP5.15□□□□□ -1.59
SNHG1-222ENST00000545308 TUSC2O75896 110 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 ZBED1O96006 694 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 SLC5A1P13866 664 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 CCT2P78371 535 aaKnown RBP5.15□□□□□ -1.59
SNHG1-222ENST00000545308 CDK17Q00537 523 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 ADCY2Q08462 1091 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 C4orf46Q504U0 113 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 PRAMEF9Q5VWM5 478 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 SLFN12LQ6IEE8 588 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 GLB1LQ6UWU2 654 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 SRGAP1Q7Z6B7 1085 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 STK32CQ86UX6 486 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 SLC16A11Q8NCK7 471 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 FAM156AQ8NDB6 213 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 DVL3Q92997 716 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-222ENST00000545308 C1GALT1C1Q96EU7 318 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 LCORQ96JN0 433 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-222ENST00000545308 ELAC2Q9BQ52 826 aaKnown RBP5.15□□□□□ -1.59
SNHG1-222ENST00000545308 AMNQ9BXJ7 453 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 PTPRHQ9HD43 1115 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 PRSS50Q9UI38 385 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 KIF13AQ9H1H9 1805 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 ZNF536O15090 1300 aa5.15□□□□□ -1.59
SNHG1-222ENST00000545308 TDRD9Q8NDG6 1382 aaKnown RBP5.15□□□□□ -1.59
SNHG1-222ENST00000545308 H3BML4 177 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 FSHBP01225 129 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 LRG1P02750 347 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 HRGP04196 525 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 ALDH2P05091 517 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 MYL3P08590 195 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 CD276Q5ZPR3 534 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 LRSAM1Q6UWE0 723 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 LIMS2Q7Z4I7 341 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 PROSER1Q86XN7 944 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 FAM126BQ8IXS8 530 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 GJA10Q969M2 543 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 LRFN3Q9BTN0 628 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 SLC39A2Q9NP94 309 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 NGRNQ9NPE2 291 aaKnown RBP5.14□□□□□ -1.59
SNHG1-222ENST00000545308 KLHL11Q9NVR0 708 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 RBPJLQ9UBG7 517 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 ST6GALNAC2Q9UJ37 374 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 DENND2AQ9ULE3 1009 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 IPPQ9Y573 584 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 MYPNQ86TC9 1320 aa5.14□□□□□ -1.59
SNHG1-222ENST00000545308 ST20-MTHFSA0A0A6YYL1 179 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 CCDC154A6NI56 674 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 HTRA2O43464 458 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-222ENST00000545308 B3GALT2O43825 422 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 UBXN7O94888 489 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 PCDH8O95206 1070 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 PTGS1P23219 599 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 ROM1Q03395 351 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 NOLC1Q14978 699 aaKnown RBP eCLIP5.13□□□□□ -1.591e-323■■■■■ 46.6
SNHG1-222ENST00000545308 SURF1Q15526 300 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 CR1LQ2VPA4 569 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 ANO4Q32M45 955 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 C3orf36Q3SXR2 165 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 TOGARAM2Q6ZUX3 1019 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 DENND1CQ8IV53 801 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 CAMKK1Q8N5S9 505 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 NRG4Q8WWG1 115 aa5.13□□□□□ -1.59
SNHG1-222ENST00000545308 RIN2Q8WYP3 895 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-222ENST00000545308 ACE2Q9BYF1 805 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-222ENST00000545308 TMEM60Q9H2L4 133 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms