RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 PDE6CP51160 858 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 GPC3P51654 580 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 ADCY2Q08462 1091 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 DMP1Q13316 513 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 CYP1B1Q16678 543 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 KRT71Q3SY84 523 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 NAA35Q5VZE5 725 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 DENND2CQ68D51 928 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 ZNF772Q68DY9 489 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 ZNF746Q6NUN9 644 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 NLRX1Q86UT6 975 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 RPUSD2Q8IZ73 545 aaKnown RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 SH2D3CQ8N5H7 860 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 OLIG1Q8TAK6 271 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 ZNF473Q8WTR7 871 aaKnown RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 CDHR1Q96JP9 859 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 NT5C1BQ96P26 610 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 CENPHQ9H3R5 247 aa14.04□□□□□ -0.16
CPSF7-223ENST00000544669 ACTR5Q9H9F9 607 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 WRAP73Q9P2S5 460 aaPredicted RBP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
CPSF7-223ENST00000544669 PASKQ96RG2 1323 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 CYP1A2P05177 515 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 ITGA4P13612 1032 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 HSPA1LP34931 641 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 SLC1A1P43005 524 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 PMS2P54278 862 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 RWDD2BP57060 319 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 CAV1Q03135 178 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 JAMLQ86YT9 394 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 MICALL1Q8N3F8 863 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 LARGE2Q8N3Y3 721 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 TTLL6Q8N841 843 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 RDH13Q8NBN7 331 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 MYCBPAPQ8TBZ2 947 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-223ENST00000544669 SHC3Q92529 594 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 ATP6V0A1Q93050 837 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 TXLNGYQ9BZA5 131 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 ROPN1BQ9BZX4 212 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-223ENST00000544669 GOLPH3Q9H4A6 298 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 ROPN1Q9HAT0 212 aaPredicted RBP14.03□□□□□ -0.16
CPSF7-223ENST00000544669 TMEM51Q9NW97 253 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 PCDHA3Q9Y5H8 950 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 CNTNAP1P78357 1384 aa14.03□□□□□ -0.16
CPSF7-223ENST00000544669 E7EVH7 732 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 ZBTB39O15060 712 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 STAM2O75886 525 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 GARTP22102 1010 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 ATP5DP30049 168 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 UBXN2AP68543 259 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 CDR2Q01850 454 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 GUCY1A3Q02108 690 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 UAP1Q16222 522 aaPredicted RBP14.02□□□□□ -0.16
CPSF7-223ENST00000544669 MAP4K3Q8IVH8 894 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 C12orf50Q8NA57 414 aaPredicted RBP14.02□□□□□ -0.16
CPSF7-223ENST00000544669 FBXL13Q8NEE6 735 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 MCPH1Q8NEM0 835 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 GRK7Q8WTQ7 553 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 SLCO2A1Q92959 643 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 MAGOHBQ96A72 148 aaKnown RBP14.02□□□□□ -0.16
CPSF7-223ENST00000544669 ZBTB9Q96C00 473 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 GPRASP2Q96D09 838 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 VEZTQ9HBM0 779 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 SLC38A10Q9HBR0 1119 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 SLC12A6Q9UHW9 1150 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 TBX20Q9UMR3 447 aa14.02□□□□□ -0.16
CPSF7-223ENST00000544669 GOLGA6L7A0A1B0GV03 622 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 CLRN2A0PK11 232 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 MYO1FO00160 1098 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 TRAPPC3O43617 180 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 LRRN2O75325 713 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 FSBPO95073 299 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 AGTP01019 485 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 GCLMP48507 274 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 GCNT1Q02742 428 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 PPP3CAQ08209 521 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 CALCOCO2Q13137 446 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 SNRNP35Q16560 246 aaKnown RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 BRDTQ58F21 947 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 TAOK1Q7L7X3 1001 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 EPS8L1Q8TE68 723 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 CLEC4DQ8WXI8 215 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 ARHGEF26Q96DR7 871 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 TMEM117Q9H0C3 514 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 BCCIPQ9P287 314 aaKnown RBP eCLIP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 ZNRF3Q9ULT6 936 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 SLX4Q8IY92 1834 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 NDC80O14777 642 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 SPOPO43791 374 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 CTNND1O60716 968 aaKnown RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 HPDP32754 393 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 TRADDQ15628 312 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 XKR9Q5GH70 373 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 GKAP1Q5VSY0 366 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 TRMT10CQ7L0Y3 403 aaKnown RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 DDX42Q86XP3 938 aaKnown RBP eCLIP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 KSR1Q8IVT5 923 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms