RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 ZNF408Q9H9D4 720 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 GOLGA6AQ9NYA3 693 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 CYP39A1Q9NYL5 469 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 FBXO40Q9UH90 709 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 UMODL1Q5DID0 1318 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 SEC24CP53992 1094 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 POLGP54098 1239 aaPredicted RBP4.07□□□□□ -1.76
BRCA2-206ENST00000544455 PLTPP55058 493 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 NNTQ13423 1086 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 BIRC3Q13489 604 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 MTM1Q13496 603 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 CEP85LQ5SZL2 805 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 CFAP58Q5T655 872 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 FAM71BQ8TC56 605 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 ATG4AQ8WYN0 398 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF516Q92618 1163 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 STRA6Q9BX79 667 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 GDF3Q9NR23 364 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 DMAC2Q9NW81 257 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 BTBD7Q9P203 1132 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 TBX20Q9UMR3 447 aa4.07□□□□□ -1.76
BRCA2-206ENST00000544455 PPP1R37O75864 691 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ATP13A4Q4VNC1 1196 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 LEKR1Q6ZMV7 388 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF662Q6ZS27 426 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ASAP3Q8TDY4 903 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 C1orf54Q8WWF1 131 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 SYN2Q92777 582 aaPredicted RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 AMFRQ9UKV5 643 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF214Q9UL59 606 aaPredicted RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TAF1LQ8IZX4 1826 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 SPDYE16A6NNV3 312 aaPredicted RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 GNGT1P63211 74 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 DPH6Q7L8W6 267 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 VPS36Q86VN1 386 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 C4orf19Q8IY42 314 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TMEM161BQ8NDZ6 487 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ALG3Q92685 438 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 CYP26B1Q9NR63 512 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 RAB20Q9NX57 234 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 AFG3L2Q9Y4W6 797 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ANKRD31Q8N7Z5 1873 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 VPS41P49754 854 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 PPATQ06203 517 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 GOLGA6L1Q8N7Z2 621 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 PARD3BQ8TEW8 1205 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 NUCKS1Q9H1E3 243 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 USTQ9Y2C2 406 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ATP8A1Q9Y2Q0 1164 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 SNX24Q9Y343 169 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ZBTB48P10074 688 aaPredicted RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TCF4P15884 667 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ECHS1P30084 290 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 PRKCIP41743 596 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 VGLL4Q14135 290 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF653Q96CK0 615 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 MOV10L1Q9BXT6 1211 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 LUC7LQ9NQ29 371 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TBC1D22BQ9NU19 505 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 FBXL5Q9UKA1 691 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 CTNNA1P35221 906 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 LIG4P49917 911 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 MXI1P50539 228 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TTC27Q6P3X3 843 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 FAM76AQ8TAV0 307 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 MRRFQ96E11 262 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 CAPS2Q9BXY5 557 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 PCDHA10Q9Y5I2 948 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ALG6Q9Y672 507 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TLDC2A0PJX2 215 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TARSL2A2RTX5 802 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 WDR64B1ANS9 1081 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 SRGAP2CP0DJJ0 459 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ATP4AP20648 1035 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 DMP1Q13316 513 aaPredicted RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ZFYVE27Q5T4F4 411 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 SYCP2LQ5T4T6 812 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 MCTP2Q6DN12 878 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 THNSL1Q8IYQ7 743 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ZDHHC14Q8IZN3 488 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 RNF10Q8N5U6 811 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 NSUN6Q8TEA1 469 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 PDGFCQ9NRA1 345 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF233A6NK53 670 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 PGRMC1O00264 195 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 SHBGP04278 402 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ACTN2P35609 894 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 NCKAP1LP55160 1127 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TNNC1P63316 161 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TNFAIP1Q13829 316 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 STXBP4Q6ZWJ1 553 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 FAM83AQ86UY5 434 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 KLRG1Q96E93 195 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 C10orf88Q9H8K7 445 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 PYGMP11217 842 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 COMTP21964 271 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 DSG3P32926 999 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 CCT5P48643 541 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 IQCDQ96DY2 449 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 CYFIP2Q96F07 1278 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms