RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.41■□□□□ 0.38
SPDEF-202ENST00000544425 GPR88Q9GZN0 384 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 TMEM8AQ9HCN3 771 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 DOCK5Q9H7D0 1870 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 ZNF233A6NK53 670 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 BTNL10A8MVZ5 291 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 ITGBL1O95965 494 aaPredicted RBP17.41■□□□□ 0.38
SPDEF-202ENST00000544425 LDHAP00338 332 aaKnown RBP17.41■□□□□ 0.38
SPDEF-202ENST00000544425 MAPK4P31152 587 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 EFNA5P52803 228 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 ARHGAP1Q07960 439 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 MXD4Q14582 209 aaPredicted RBP17.41■□□□□ 0.38
SPDEF-202ENST00000544425 BMS1Q14692 1282 aaKnown RBP17.41■□□□□ 0.38
SPDEF-202ENST00000544425 TRAPPC11Q7Z392 1133 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 LRRN4CLQ8ND94 238 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 PRPF31Q8WWY3 499 aaKnown RBP17.41■□□□□ 0.38
SPDEF-202ENST00000544425 UBXN4Q92575 508 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 KATNBL1Q9H079 304 aa17.41■□□□□ 0.38
SPDEF-202ENST00000544425 MACROD2A1Z1Q3 448 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 LRRIQ3A6PVS8 624 aaPredicted RBP17.4■□□□□ 0.38
SPDEF-202ENST00000544425 EVI5O60447 810 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 GH1P01241 217 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 CLDN10P78369 228 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 CAPSQ13938 189 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 NAB2Q15742 525 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 TMEM63BQ5T3F8 832 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 SRGAP1Q7Z6B7 1085 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 PLEKHH3Q7Z736 793 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 PSPC1Q8WXF1 523 aaKnown RBP17.4■□□□□ 0.38
SPDEF-202ENST00000544425 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.4■□□□□ 0.38
SPDEF-202ENST00000544425 NENFQ9UMX5 172 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 JRKLQ9Y4A0 524 aa17.4■□□□□ 0.38
SPDEF-202ENST00000544425 MARK3P27448 753 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 GPC3P51654 580 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 ERCC6LQ2NKX8 1250 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 ZPBP2Q6X784 338 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 DPP9Q86TI2 863 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 ZCCHC17Q9NP64 241 aaKnown RBP17.39■□□□□ 0.38
SPDEF-202ENST00000544425 ERAP1Q9NZ08 941 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 NAGPAQ9UK23 515 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 SAR1BQ9Y6B6 198 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 WDR81Q562E7 1941 aa17.39■□□□□ 0.38
SPDEF-202ENST00000544425 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 PRLRP16471 622 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 ENOX2Q16206 610 aaKnown RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 CDCA2Q69YH5 1023 aaPredicted RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 RSRC2Q7L4I2 434 aaKnown RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 TRIM50Q86XT4 487 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 MSL3Q8N5Y2 521 aaKnown RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 PPTC7Q8NI37 304 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 CCDC127Q96BQ5 260 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 NOX5Q96PH1 765 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 ALS2CR12Q96Q35 445 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 MAP7D2Q96T17 732 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 FAM213AQ9BRX8 229 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 UBE2TQ9NPD8 197 aaPredicted RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 AGO2Q9UKV8 859 aaKnown RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 INTUQ9ULD6 942 aa17.39■□□□□ 0.37
SPDEF-202ENST00000544425 V9GYY5 206 aaPredicted RBP17.39■□□□□ 0.37
SPDEF-202ENST00000544425 A0A0B4J269 797 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 ATP1A1P05023 1023 aaKnown RBP17.38■□□□□ 0.37
SPDEF-202ENST00000544425 HUNKP57058 714 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 DRP2Q13474 957 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 KIF22Q14807 665 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 PSMD6Q15008 389 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 ELF2Q15723 593 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 KIAA0753Q2KHM9 967 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 ZNF484Q5JVG2 852 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 ALKBH5Q6P6C2 394 aaKnown RBP17.38■□□□□ 0.37
SPDEF-202ENST00000544425 SLC30A5Q8TAD4 765 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 MAML3Q96JK9 1138 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 SYT11Q9BT88 431 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 C2orf40Q9H1Z8 148 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 SALL4Q9UJQ4 1053 aa17.38■□□□□ 0.37
SPDEF-202ENST00000544425 FOXN3O00409 490 aaPredicted RBP17.37■□□□□ 0.37
SPDEF-202ENST00000544425 ASAP2O43150 1006 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 MOCS3O95396 460 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 LAMTOR4Q0VGL1 99 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 FBXL13Q8NEE6 735 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 TARS2Q9BW92 718 aaKnown RBP17.37■□□□□ 0.37
SPDEF-202ENST00000544425 CCDC113Q9H0I3 377 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 SUGCTQ9HAC7 445 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 RAB20Q9NX57 234 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 SLC5A4Q9NY91 659 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 CAPN6Q9Y6Q1 641 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 MANSC4A6NHS7 340 aaPredicted RBP17.37■□□□□ 0.37
SPDEF-202ENST00000544425 DDX3XO00571 662 aaKnown RBP eCLIP17.37■□□□□ 0.37
SPDEF-202ENST00000544425 ENC1O14682 589 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 PPFIA4O75335 1185 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 MAP2K1Q02750 393 aaPredicted RBP17.37■□□□□ 0.37
SPDEF-202ENST00000544425 IRF5Q13568 498 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 ARHGAP44Q17R89 818 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 CRELD2Q6UXH1 353 aaPredicted RBP17.37■□□□□ 0.37
SPDEF-202ENST00000544425 C15orf39Q6ZRI6 1047 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 SV2AQ7L0J3 742 aa17.37■□□□□ 0.37
SPDEF-202ENST00000544425 ARHGEF19Q8IW93 802 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms