RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 MIF4GDA9UHW6 222 aaKnown RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 TULP2O00295 520 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 FTLP02792 175 aaPredicted RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 GPC3P51654 580 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 GPC5P78333 572 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 SNRNP35Q16560 246 aaKnown RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 KRT39Q6A163 491 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 RPUSD2Q8IZ73 545 aaKnown RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 MORC4Q8TE76 937 aa19.14■□□□□ 0.65
SCARB1-208ENST00000544327 SEPT11Q9NVA2 429 aaKnown RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 RGS17Q9UGC6 210 aaPredicted RBP19.14■□□□□ 0.65
SCARB1-208ENST00000544327 ANKRD63C9JTQ0 380 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 NFKBIEO00221 500 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 NR3C2P08235 984 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 KCNA2P16389 499 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 CHRNB2P17787 502 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 BAG6P46379 1132 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 MFAP3P55082 362 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 PTENP60484 403 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 CBWD2Q8IUF1 395 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 EPS8L1Q8TE68 723 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 PARD3BQ8TEW8 1205 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 ATP6V0A1Q93050 837 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 KREMEN1Q96MU8 473 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 RPS6KC1Q96S38 1066 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 PLEKHA4Q9H4M7 779 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 PDLIM7Q9NR12 457 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 FAM114A2Q9NRY5 505 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 HACL1Q9UJ83 578 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 RIPK3Q9Y572 518 aa19.13■□□□□ 0.65
SCARB1-208ENST00000544327 ATP2A1O14983 1001 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 FGGP02679 453 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 CNGA1P29973 690 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 DSG3P32926 999 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 IRAK1P51617 712 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 MICALL2Q8IY33 904 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 ZNF280CQ8ND82 737 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 KCNN1Q92952 543 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 WNK4Q96J92 1243 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 RNPC3Q96LT9 517 aaKnown RBP19.12■□□□□ 0.65
SCARB1-208ENST00000544327 SH2D3AQ9BRG2 576 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 CAPS2Q9BXY5 557 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 KMT5AQ9NQR1 393 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 LOC285556D6RIA3 1793 aa19.12■□□□□ 0.65
SCARB1-208ENST00000544327 DENND3A2RUS2 1198 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 CCDC169A6NNP5 214 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 STAM2O75886 525 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 HSPA6P17066 643 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 ABCD1P33897 745 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 HLTFQ14527 1009 aaKnown RBP eCLIP19.11■□□□□ 0.65
SCARB1-208ENST00000544327 NBPF12Q5TAG4 269 aaPredicted RBP19.11■□□□□ 0.65
SCARB1-208ENST00000544327 POTEAQ6S8J7 498 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 NOP9Q86U38 636 aaKnown RBP19.11■□□□□ 0.65
SCARB1-208ENST00000544327 MCPH1Q8NEM0 835 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 HELQQ8TDG4 1101 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 NSUN6Q8TEA1 469 aaKnown RBP19.11■□□□□ 0.65
SCARB1-208ENST00000544327 BSNDQ8WZ55 320 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 SEMA4DQ92854 862 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 KAT5Q92993 513 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 CDHR1Q96JP9 859 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 PCDHB18PQ96TA0 734 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.11■□□□□ 0.65
SCARB1-208ENST00000544327 AMACRQ9UHK6 382 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 ALG6Q9Y672 507 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 LTBP3Q9NS15 1303 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 GOLGA6L10A0A0M3HER8 536 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 GOLGA8IPA6NC78 632 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 GOLGA8JA6NMD2 632 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 ZNF862O60290 1169 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 SGPL1O95470 568 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 PTPRAP18433 802 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 GMPSP49915 693 aaPredicted RBP19.11■□□□□ 0.65
SCARB1-208ENST00000544327 SLC39A4Q6P5W5 647 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 KDM7AQ6ZMT4 941 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 USP37Q86T82 979 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 GABBR1Q9UBS5 961 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 ZNF214Q9UL59 606 aaPredicted RBP19.11■□□□□ 0.65
SCARB1-208ENST00000544327 KIAA1217Q5T5P2 1943 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 GRIN2DO15399 1336 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 SYNGAP1Q96PV0 1343 aa19.11■□□□□ 0.65
SCARB1-208ENST00000544327 FAM187AA6NFU0 413 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 H0YGN5 161 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 EIF3HO15372 352 aaKnown RBP eCLIP19.1■□□□□ 0.651e-5■□□□□ 9.1
SCARB1-208ENST00000544327 DGAT1O75907 488 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 KRT14P02533 472 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 PSAPP07602 524 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 GARTP22102 1010 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 HSD17B3P37058 310 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 CYP24A1Q07973 514 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 MTMR3Q13615 1198 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 SPDYCQ5MJ68 293 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 UBL4BQ8N7F7 174 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 ALG3Q92685 438 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 CEP170P1Q96L14 293 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 RAB17Q9H0T7 212 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 NEUROG2Q9H2A3 272 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 CTTNBP2NLQ9P2B4 639 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 PLAAQ9Y263 795 aa19.1■□□□□ 0.65
SCARB1-208ENST00000544327 UTP11Q9Y3A2 253 aaKnown RBP19.1■□□□□ 0.65
SCARB1-208ENST00000544327 NFS1Q9Y697 457 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms