RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 NLRP9Q7RTR0 991 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 CLEC4FQ8N1N0 589 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 C19orf60Q96EN9 201 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 NLRP4Q96MN2 994 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 NDEL1Q9GZM8 345 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 PARD3Q8TEW0 1356 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 EIF2AK4Q9P2K8 1649 aaKnown RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 SUPT3HB4E1H0 165 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 CYTH3O43739 400 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 FGAP02671 866 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 ARL4DP49703 201 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 GRAMD1AQ96CP6 724 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 PIGSQ96S52 555 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 SLC13A1Q9BZW2 595 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 NSMCE4AQ9NXX6 385 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 DDX56Q9NY93 547 aaKnown RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 SERPIND1P05546 499 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 GPC5P78333 572 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 RAD51Q06609 339 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 LRRC74AQ0VAA2 488 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 PDXDC2PQ6P474 469 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 TMEM35BQ8NCS4 154 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 UNC45AQ9H3U1 944 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 UBN2Q6ZU65 1347 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 ADGRL3Q9HAR2 1447 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 HUS1O60921 280 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 PRKCQQ04759 706 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 TP53BP2Q13625 1128 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 SARM1Q6SZW1 724 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 CATSPER4Q7RTX7 472 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 GRAMD1CQ8IYS0 662 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11□□□□□ -0.65
PCDH9-204ENST00000544246 ASZ1Q8WWH4 475 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 FAM162AQ96A26 154 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 WWP1Q9H0M0 922 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 C6orf203Q9P0P8 240 aaPredicted RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 LRRC53A6NM62 1247 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 AKAP10O43572 662 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 SRP72O76094 671 aaKnown RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 MARK3P27448 753 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 PDIA2Q13087 525 aaKnown RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 E4F1Q66K89 784 aaPredicted RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 DNAJC10Q8IXB1 793 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 INPP5DQ92835 1189 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 EDC3Q96F86 508 aaKnown RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 SNF8Q96H20 258 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 SETD1BQ9UPS6 1966 aaKnown RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 K7ERI5 159 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 MYO1CO00159 1063 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 EIF2S1P05198 315 aaKnown RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 PGM1P36871 562 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 CHRNDQ07001 517 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 SF3B3Q15393 1217 aaKnown RBP11□□□□□ -0.65
PCDH9-204ENST00000544246 ZNF699Q32M78 642 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 EFHC2Q5JST6 749 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 ARHGAP17Q68EM7 881 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 IYDQ6PHW0 289 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 SCFD1Q8WVM8 642 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 TRIM62Q9BVG3 475 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 SCN3BQ9NY72 215 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 DNAJC12Q9UKB3 198 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 STAP1Q9ULZ2 295 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 MAP3K19Q56UN5 1328 aa11□□□□□ -0.65
PCDH9-204ENST00000544246 NPM3O75607 178 aaKnown RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 BMP3P12645 472 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 GGCXP38435 758 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 GPC3P51654 580 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 ALDH18A1P54886 795 aaKnown RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SUPT20HL1Q3ZLR7 823 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 ST13P5Q8NFI4 369 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SYNDIG1Q9H7V2 258 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SAMSN1Q9NSI8 373 aaKnown RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 IP6K2Q9UHH9 426 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 GNAT1P11488 350 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 EN1Q05925 392 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 NUP93Q8N1F7 819 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SPON1Q9HCB6 807 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 EXOSC4Q9NPD3 245 aaKnown RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SLC16A2P36021 539 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 ZBED8Q8IZ13 594 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 BEST2Q8NFU1 509 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 CEP72Q9P209 647 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SOX13Q9UN79 622 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 MADDQ8WXG6 1647 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 M0QYV0 167 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 BRAFP15056 766 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 TYK2P29597 1187 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SDC4P31431 198 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 CHRNA3P32297 505 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 ADCK5Q3MIX3 580 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SLC27A3Q5K4L6 730 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 ANKRD40Q6AI12 368 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 C16orf89Q6UX73 402 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 TEX2Q8IWB9 1127 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 ATP11CQ8NB49 1132 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 PAGE5Q96GU1 130 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SMARCAD1Q9H4L7 1026 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms