RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SLC4A7Q9Y6M7 1214 aa15.89■□□□□ 0.13
TNFRSF1A-216ENST00000543995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 KCNA1Q09470 495 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ISM2Q6H9L7 571 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SLC27A1Q6PCB7 646 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 KIAA0895Q8NCT3 520 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SPATA20Q8TB22 786 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 CCDC51Q96ER9 411 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 STRA6Q9BX79 667 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PDZD7Q9H5P4 517 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TMEM206Q9H813 350 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 FAM105AQ9NUU6 356 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 KIAA1468Q9P260 1216 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ANKFY1Q9P2R3 1169 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TNFSF13BQ9Y275 285 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 GDAQ9Y2T3 454 aa15.88■□□□□ 0.13
TNFRSF1A-216ENST00000543995 BIN1O00499 593 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 NPTXRO95502 500 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SKIP12755 728 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SARSP49591 514 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 RAB27AP51159 221 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 DEFB103AP81534 67 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ZNF568Q3ZCX4 644 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ZNF658Q5TYW1 1059 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ZPBP2Q6X784 338 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 EPM2AIP1Q7L775 607 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 APBB1IPQ7Z5R6 666 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ZBTB33Q86T24 672 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 NELFCDQ8IXH7 590 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 RNF169Q8NCN4 708 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ZNF507Q8TCN5 953 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 EIF2AQ9BY44 585 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MAN1B1Q9UKM7 699 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 LRFN2Q9ULH4 789 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PCDHB7Q9Y5E2 793 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 UBE4BO95155 1302 aa15.87■□□□□ 0.13
TNFRSF1A-216ENST00000543995 A0A0U1RQF3 1178 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 C9IYK1 514 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 CLDN3O15551 220 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TOM1L1O75674 476 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 UPP2O95045 317 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 KIF20AO95235 890 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PRPF38BQ5VTL8 546 aaKnown RBP15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 EEF1DP3Q658K8 133 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SMYD4Q8IYR2 804 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TDHQ8IZJ6 230 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SCFD1Q8WVM8 642 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SYAP1Q96A49 352 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SLC9A7Q96T83 725 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MAPK8IP1Q9UQF2 711 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PCDHB2Q9Y5E7 798 aa15.86■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PTPRSQ13332 1948 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PIGRP01833 764 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 STAG3L1P0CL83 205 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 HARSP12081 509 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 NFKBIBQ15653 356 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 DCAF4L1Q3SXM0 396 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 UBXN11Q5T124 520 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 CCDC183Q5T5S1 534 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 CAVIN1Q6NZI2 390 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 FAM117BQ6P1L5 589 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MPZL3Q6UWV2 235 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ECHDC2Q86YB7 292 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 HACE1Q8IYU2 909 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ZBTB45Q96K62 511 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TRAIPQ9BWF2 469 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 GTPBP4Q9BZE4 634 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TTC3P53804 2025 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 CEP290O15078 2479 aa15.85■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ANKRD63C9JTQ0 380 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 NOLC1Q14978 699 aaKnown RBP eCLIP15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 KNOP1Q1ED39 458 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 KLHL40Q2TBA0 621 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 RASIP1Q5U651 963 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SLFN12LQ6IEE8 588 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TMCO2Q7Z6W1 182 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 NPAS4Q8IUM7 802 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PGBD4Q96DM1 585 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 ZBED2Q9BTP6 218 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 APOL6Q9BWW8 343 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 GBP3Q9H0R5 595 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 IKZF4Q9H2S9 585 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PTPRHQ9HD43 1115 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TMEM161AQ9NX61 479 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 IPPQ9Y573 584 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TISP43B9A030 160 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 EOMESO95936 686 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MCF2P10911 925 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 PROZP22891 400 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 HOXD13P35453 343 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 FAM189BP81408 668 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 MORC3Q14149 939 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 BMT2Q1RMZ1 405 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SKOR2Q2VWA4 1001 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SLC39A4Q6P5W5 647 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 HS2ST1Q7LGA3 356 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 TRIML1Q8N9V2 468 aa15.84■□□□□ 0.13
TNFRSF1A-216ENST00000543995 SMG8Q8ND04 991 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms