RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TFAP4Q01664 338 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 SGCGQ13326 291 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 COG2Q14746 738 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 Q3ZCU0 254 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 MAEAQ7L5Y9 396 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 MAMDC2Q7Z304 686 aaPredicted RBP9.48□□□□□ -0.89
VPS13D-212ENST00000543766 C10orf53Q8N6V4 93 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 NLRP3Q96P20 1036 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 ATP6V1HQ9UI12 483 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 PNPLA6Q8IY17 1366 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 SGSM1Q2NKQ1 1148 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 ARSHQ5FYA8 562 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 CYP4F22Q6NT55 531 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 ARMCX5Q6P1M9 558 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 CEP85Q6P2H3 762 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 KDELC1Q6UW63 502 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 IL17RDQ8NFM7 739 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 SPATA18Q8TC71 538 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 RILPL2Q969X0 211 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 PUS3Q9BZE2 481 aaKnown RBP9.48□□□□□ -0.89
VPS13D-212ENST00000543766 VPS11Q9H270 941 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 SLC12A5Q9H2X9 1139 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 VCXQ9H320 206 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 RAB21Q9UL25 225 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 HPCAL4Q9UM19 191 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 TMX2Q9Y320 296 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 ATXN2Q99700 1313 aaKnown RBP9.48□□□□□ -0.89
VPS13D-212ENST00000543766 COL22A1Q8NFW1 1626 aaPredicted RBP9.48□□□□□ -0.89
VPS13D-212ENST00000543766 ENC1O14682 589 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 ANP32DO95626 131 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 MT-ND3P03897 115 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 PGRP06401 933 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 RARGP13631 454 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 LONRF2Q1L5Z9 754 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 USH1GQ495M9 461 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 SPATS1Q496A3 300 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 TINF2Q9BSI4 451 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 TEX12Q9BXU0 123 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 NIFKQ9BYG3 293 aaKnown RBP9.48□□□□□ -0.89
VPS13D-212ENST00000543766 PCDHGA2Q9Y5H1 932 aa9.48□□□□□ -0.89
VPS13D-212ENST00000543766 SHOX2O60902 331 aaPredicted RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 YEATS4O95619 227 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 ZFYP08048 801 aaPredicted RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 ATF6P18850 670 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 ADSLP30566 484 aaPredicted RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 CBX5P45973 191 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 SARSP49591 514 aaKnown RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 PDE1AP54750 535 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 FKBP4Q02790 459 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 ZBTB16Q05516 673 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 SLC22A9Q8IVM8 553 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 REXO1Q8N1G1 1221 aaKnown RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 PDZD8Q8NEN9 1154 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 TBATAQ96M53 351 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 HEMGNQ9BXL5 484 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 WASH6PQ9NQA3 447 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 SIRT5Q9NXA8 310 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 VANGL2Q9ULK5 521 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 FOXP2O15409 715 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 CYP4F8P98187 520 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 CWF19L2Q2TBE0 894 aaKnown RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 TATDN1Q6P1N9 297 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 TLDC1Q6P9B6 456 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 ZDHHC17Q8IUH5 632 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 RUFY2Q8WXA3 655 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 MAML1Q92585 1016 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 EHD1Q9H4M9 534 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 SIRPGQ9P1W8 387 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 NALCNQ8IZF0 1738 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 ABCC6O95255 1503 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 LOC105371267A0A1B0GV96 52 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 PSMD11O00231 422 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 CACNB4O00305 520 aaPredicted RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 KRIT1O00522 736 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 UBXN1Q04323 297 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 SMU1Q2TAY7 513 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 FAM26DQ5JW98 314 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 C11orf57Q6ZUT1 292 aaPredicted RBP9.47□□□□□ -0.89
VPS13D-212ENST00000543766 C16orf86Q6ZW13 317 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 AKAP14Q86UN6 197 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 SLC38A6Q8IZM9 456 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 DDHD1Q8NEL9 900 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 KCTD4Q8WVF5 259 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 PEX13Q92968 403 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 WDR24Q96S15 920 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 ZFP57Q9NU63 452 aa9.47□□□□□ -0.89
VPS13D-212ENST00000543766 CYP2D7A0A087X1C5 515 aa9.46□□□□□ -0.89
VPS13D-212ENST00000543766 LTA4HP09960 611 aaKnown RBP9.46□□□□□ -0.89
VPS13D-212ENST00000543766 ZNF76P36508 570 aa9.46□□□□□ -0.89
VPS13D-212ENST00000543766 GNL1P36915 607 aaPredicted RBP9.46□□□□□ -0.89
VPS13D-212ENST00000543766 IFRD2Q12894 506 aaPredicted RBP9.46□□□□□ -0.89
VPS13D-212ENST00000543766 MTMR3Q13615 1198 aa9.46□□□□□ -0.89
VPS13D-212ENST00000543766 DSC3Q14574 896 aa9.46□□□□□ -0.89
VPS13D-212ENST00000543766 HACE1Q8IYU2 909 aa9.46□□□□□ -0.89
VPS13D-212ENST00000543766 OR6C4Q8NGE1 309 aa9.46□□□□□ -0.89
VPS13D-212ENST00000543766 SLC39A13Q96H72 371 aa9.46□□□□□ -0.89
VPS13D-212ENST00000543766 PGBD1Q96JS3 809 aa9.46□□□□□ -0.89
VPS13D-212ENST00000543766 RPRD1AQ96P16 312 aaPredicted RBP9.46□□□□□ -0.89
VPS13D-212ENST00000543766 PCDHB6Q9Y5E3 794 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms