RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	DZANK1	Q9NVP4	752 aa		7.28	□□□□□ -1.24
CIT-213	ENST00000543324	RBM28	Q9NW13	759 aa	Known RBP	7.28	□□□□□ -1.24
CIT-213	ENST00000543324	EPS15L1	Q9UBC2	864 aa		7.28	□□□□□ -1.24
CIT-213	ENST00000543324	DKK4	Q9UBT3	224 aa		7.28	□□□□□ -1.24
CIT-213	ENST00000543324	NOL7	Q9UMY1	257 aa	Known RBP	7.28	□□□□□ -1.24
CIT-213	ENST00000543324	TCHH	Q07283	1943 aa		7.28	□□□□□ -1.24
CIT-213	ENST00000543324	MYH15	Q9Y2K3	1946 aa		7.28	□□□□□ -1.24
CIT-213	ENST00000543324	CSMD1	Q96PZ7	3565 aa		7.28	□□□□□ -1.24
CIT-213	ENST00000543324	NFASC	O94856	1347 aa		7.27	□□□□□ -1.24
CIT-213	ENST00000543324	GSTTP1	A0A1W2PQM5	241 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	hCG_1642624	A0A1W2PR95	340 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	ESYT2	A0FGR8	921 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	SHISA7	A6NL88	538 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	MAFG	O15525	162 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	HMGB1	P09429	215 aa	Known RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	TARS	P26639	723 aa	Known RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	SREBF1	P36956	1147 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	ABCG1	P45844	678 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	ADCY1	Q08828	1119 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	MGAT3	Q09327	533 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	FZD5	Q13467	585 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	KRT32	Q14532	448 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	PPP2R5D	Q14738	602 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	MLF2	Q15773	248 aa	Predicted RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	NTRK3	Q16288	839 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	PAN2	Q504Q3	1202 aa	Known RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	MARCH8	Q5T0T0	291 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	TCEAL6	Q6IPX3	200 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	NFXL1	Q6ZNB6	911 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	CYFIP1	Q7L576	1253 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	NIPA1	Q7RTP0	329 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	RAB44	Q7Z6P3	723 aa	Predicted RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	GPR149	Q86SP6	731 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	RAB11FIP4	Q86YS3	637 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	SCUBE3	Q8IX30	993 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	GIMAP8	Q8ND71	665 aa	Predicted RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	SMARCC2	Q8TAQ2	1214 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	LMBR1	Q8WVP7	490 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	PIBF1	Q8WXW3	757 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	BBX	Q8WY36	941 aa	Predicted RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	CUL5	Q93034	780 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	TCEAL3	Q969E4	200 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	CDHR1	Q96JP9	859 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	TCEANC2	Q96MN5	208 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	PCYT2	Q99447	389 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	ALG1	Q9BT22	464 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	RNPEP	Q9H4A4	650 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	EHMT1	Q9H9B1	1298 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	MLXIP	Q9HAP2	919 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	ENTPD7	Q9NQZ7	604 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	TMEM260	Q9NX78	707 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	BARHL2	Q9NY43	387 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	RTEL1	Q9NZ71	1219 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	IL17B	Q9UHF5	180 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	PCDHA6	Q9UN73	950 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	LZTS1	Q9Y250	596 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	PCDHB12	Q9Y5F1	795 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	PCDHA8	Q9Y5H6	950 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	SNX14	Q9Y5W7	946 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	ASCC3	Q8N3C0	2202 aa	Known RBP	7.27	□□□□□ -1.25
CIT-213	ENST00000543324	NRCAM	Q92823	1304 aa		7.27	□□□□□ -1.25
CIT-213	ENST00000543324	SPEN	Q96T58	3664 aa	Known RBP	7.26	□□□□□ -1.25
CIT-213	ENST00000543324	AHCTF1	Q8WYP5	2266 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	TLN1	Q9Y490	2541 aa	Known RBP	7.26	□□□□□ -1.25
CIT-213	ENST00000543324	IGLV3-22	A0A075B6J6	115 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	IGKV6D-21	A0A0A0MT36	114 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	C17orf102	A2RUQ5	167 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324		K7ELQ4	463 aa	Predicted RBP	7.26	□□□□□ -1.25
CIT-213	ENST00000543324	MEIS1	O00470	390 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	ADAMTS3	O15072	1205 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	ZBTB43	O43298	467 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	EDIL3	O43854	480 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	SLC28A2	O43868	658 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	SORBS3	O60504	671 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	CLASP2	O75122	1294 aa	Known RBP	7.26	□□□□□ -1.25
CIT-213	ENST00000543324	ATG7	O95352	703 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	TCF7	P36402	384 aa	Predicted RBP	7.26	□□□□□ -1.25
CIT-213	ENST00000543324	ITGB3BP	Q13352	177 aa	Predicted RBP	7.26	□□□□□ -1.25
CIT-213	ENST00000543324	AP3B2	Q13367	1082 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	MTMR1	Q13613	665 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	RTN1	Q16799	776 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	PFKFB3	Q16875	520 aa	Predicted RBP	7.26	□□□□□ -1.25
CIT-213	ENST00000543324	LETM2	Q2VYF4	491 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	SASS6	Q6UVJ0	657 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	TMC5	Q6UXY8	1006 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	HEATR3	Q7Z4Q2	680 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	NLRX1	Q86UT6	975 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	ATP6V0A1	Q93050	837 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	ZMYND12	Q9H0C1	365 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	VPS45	Q9NRW7	570 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	KCNH7	Q9NS40	1196 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	PCDHGA5	Q9Y5G8	931 aa		7.26	□□□□□ -1.25
CIT-213	ENST00000543324	KLF18	A0A0U1RQI7	1052 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	GOLGA8A	A7E2F4	631 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	GOLGA8B	A8MQT2	603 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	CHURC1-FNTB	B4DL54	471 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	NOP56	O00567	594 aa	Known RBP	7.25	□□□□□ -1.25
CIT-213	ENST00000543324	ENPP3	O14638	875 aa		7.25	□□□□□ -1.25
CIT-213	ENST00000543324	NCAM2	O15394	837 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms