RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 MRPL4Q9BYD3 311 aaKnown RBP20.23■□□□□ 0.83
COPS7A-216ENST00000543170 TRIM6Q9C030 488 aaPredicted RBP20.23■□□□□ 0.83
COPS7A-216ENST00000543170 ST6GALNAC4Q9H4F1 302 aa20.23■□□□□ 0.83
COPS7A-216ENST00000543170 UBN1Q9NPG3 1134 aa20.23■□□□□ 0.83
COPS7A-216ENST00000543170 IPPQ9Y573 584 aa20.23■□□□□ 0.83
COPS7A-216ENST00000543170 MRPL42Q9Y6G3 142 aaKnown RBP20.23■□□□□ 0.83
COPS7A-216ENST00000543170 TTLL13PA6NNM8 815 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 TRAK2O60296 914 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 PFKFB1P16118 471 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 GAP43P17677 238 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 STRN3Q13033 797 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 DCAF4L1Q3SXM0 396 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 PAN2Q504Q3 1202 aaKnown RBP20.22■□□□□ 0.83
COPS7A-216ENST00000543170 ATF7IP2Q5U623 682 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 DYMQ7RTS9 669 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 APBB1IPQ7Z5R6 666 aaPredicted RBP20.22■□□□□ 0.83
COPS7A-216ENST00000543170 SPRED2Q7Z698 418 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 FAM178BQ8IXR5 827 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 TMEM192Q8IY95 271 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 RNF169Q8NCN4 708 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 ARNTL2Q8WYA1 636 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 C17orf80Q9BSJ5 609 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 PLVAPQ9BX97 442 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 PRDM12Q9H4Q4 367 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 CHMP5Q9NZZ3 219 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 USP25Q9UHP3 1055 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 TNFSF13BQ9Y275 285 aa20.22■□□□□ 0.83
COPS7A-216ENST00000543170 EPOPA6NHQ4 379 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 K7ENM7 598 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 INPPL1O15357 1258 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 RB1P06400 928 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 LIG1P18858 919 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 TMEM132AQ24JP5 1023 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 EPC2Q52LR7 807 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 NT5DC1Q5TFE4 455 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 GLB1LQ6UWU2 654 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 AGMOQ6ZNB7 445 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 HAUS6Q7Z4H7 955 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 FBXO22Q8NEZ5 403 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 HELQQ8TDG4 1101 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 GAS2L1Q99501 681 aaPredicted RBP20.21■□□□□ 0.83
COPS7A-216ENST00000543170 ACO2Q99798 780 aaKnown RBP20.21■□□□□ 0.83
COPS7A-216ENST00000543170 TRIM9Q9C026 710 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 RSAD1Q9HA92 442 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 GDPD2Q9HCC8 539 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 OLFML3Q9NRN5 406 aa20.21■□□□□ 0.83
COPS7A-216ENST00000543170 NPTXRO95502 500 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 SLFN14P0C7P3 912 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 ITGA4P13612 1032 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 BMPR1AP36894 532 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 ZPBP2Q6X784 338 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 SFR1Q86XK3 245 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 MRPS27Q92552 414 aaKnown RBP20.2■□□□□ 0.82
COPS7A-216ENST00000543170 LPPQ93052 612 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 P2RX5Q93086 422 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 NXF3Q9H4D5 531 aaKnown RBP20.2■□□□□ 0.82
COPS7A-216ENST00000543170 ZHX3Q9H4I2 956 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 CERS4Q9HA82 394 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 PTPRHQ9HD43 1115 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 STXBP5LQ9Y2K9 1186 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 GIT1Q9Y2X7 761 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 TRANK1O15050 2925 aa20.2■□□□□ 0.82
COPS7A-216ENST00000543170 A0A1B0GVL5 298 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 CARNS1A5YM72 827 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 MEIS3P2A8K0S8 358 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 ACTN4O43707 911 aaKnown RBP20.19■□□□□ 0.82
COPS7A-216ENST00000543170 OFD1O75665 1012 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 PIGRP01833 764 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 LAG3P18627 525 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 POU3F3P20264 500 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-216ENST00000543170 PROZP22891 400 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 CTNNB1P35222 781 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 GTF2BQ00403 316 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 CSPP1Q1MSJ5 1256 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 NOMO2Q5JPE7 1267 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 EEF1DP3Q658K8 133 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 CDR2LQ86X02 465 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-216ENST00000543170 CEP57L1Q8IYX8 460 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 MYLIPQ8WY64 445 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 HVCN1Q96D96 273 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 C7orf25Q9BPX7 421 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 C11orf84Q9BUA3 381 aaPredicted RBP20.19■□□□□ 0.82
COPS7A-216ENST00000543170 CWH43Q9H720 699 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 AAASQ9NRG9 546 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 TYW1Q9NV66 732 aaKnown RBP20.19■□□□□ 0.82
COPS7A-216ENST00000543170 MTUS1Q9ULD2 1270 aa20.19■□□□□ 0.82
COPS7A-216ENST00000543170 H3BNC9 293 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 ABLIM1O14639 778 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 PPP1R37O75864 691 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 FOSL2P15408 326 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 SYKP43405 635 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 ALCAMQ13740 583 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 LRRC55Q6ZSA7 311 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 MAP4K3Q8IVH8 894 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 CCDC65Q8IXS2 484 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 URGCPQ8TCY9 931 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 TARS2Q9BW92 718 aaKnown RBP20.18■□□□□ 0.82
COPS7A-216ENST00000543170 LMCD1Q9NZU5 365 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 KANSL3Q9P2N6 904 aa20.18■□□□□ 0.82
COPS7A-216ENST00000543170 TBX20Q9UMR3 447 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms