RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 HLA-DOAP06340 250 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 PFKMP08237 780 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 POU3F2P20265 443 aaPredicted RBP3.48□□□□□ -1.85
KNTC1-213ENST00000542727 LMO1P25800 156 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 PHC1P78364 1004 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 CD69Q07108 199 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 ERCC6LQ2NKX8 1250 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 FAM214AQ32MH5 1076 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 ARMC6Q6NXE6 501 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 OLFML1Q6UWY5 402 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 UNQ6494/PRO21346Q6UXR6 183 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 Q6YL49 198 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 ADGRG3Q86Y34 549 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 GLB1L2Q8IW92 636 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 LCORLQ8N3X6 602 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 BEND2Q8NDZ0 799 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 GPR150Q8NGU9 434 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 SLC9A6Q92581 669 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 MRFAP1L1Q96HT8 127 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 PAWRQ96IZ0 340 aaKnown RBP3.48□□□□□ -1.85
KNTC1-213ENST00000542727 CPEB1Q9BZB8 566 aaKnown RBP3.48□□□□□ -1.85
KNTC1-213ENST00000542727 SERHL2Q9H4I8 314 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.48□□□□□ -1.85
KNTC1-213ENST00000542727 TMEM260Q9NX78 707 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 CDK11AQ9UQ88 783 aaPredicted RBP3.48□□□□□ -1.85
KNTC1-213ENST00000542727 CHST2Q9Y4C5 530 aa3.48□□□□□ -1.85
KNTC1-213ENST00000542727 ATP2A2P16615 1042 aaKnown RBP3.47□□□□□ -1.85
KNTC1-213ENST00000542727 ZEB1P37275 1124 aaPredicted RBP3.47□□□□□ -1.85
KNTC1-213ENST00000542727 CASRP41180 1078 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 C21orf58P58505 322 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 MXRA7P84157 204 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 DSG1Q02413 1049 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 PABPC4Q13310 644 aaKnown RBP eCLIP3.47□□□□□ -1.85
KNTC1-213ENST00000542727 SQSTM1Q13501 440 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 CCDC62Q6P9F0 684 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 GPRIN1Q7Z2K8 1008 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 LILRA3Q8N6C8 439 aaPredicted RBP3.47□□□□□ -1.85
KNTC1-213ENST00000542727 GAB3Q8WWW8 586 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 BBC3Q96PG8 261 aaPredicted RBP3.47□□□□□ -1.85
KNTC1-213ENST00000542727 LSM14BQ9BX40 385 aaKnown RBP3.47□□□□□ -1.85
KNTC1-213ENST00000542727 PIF1Q9H611 641 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 AKIP1Q9NQ31 210 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 ADARB2Q9NS39 739 aaKnown RBP3.47□□□□□ -1.85
KNTC1-213ENST00000542727 TRPM5Q9NZQ8 1165 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 MSRAQ9UJ68 235 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 COX11Q9Y6N1 276 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 NUMBLQ9Y6R0 609 aa3.47□□□□□ -1.85
KNTC1-213ENST00000542727 A0A1W2PR48 441 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 MASP2O00187 686 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 ELL2O00472 640 aaPredicted RBP3.46□□□□□ -1.86
KNTC1-213ENST00000542727 HKR1P10072 659 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 RBP3P10745 1247 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 SDSP20132 328 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 ZFP36P26651 326 aaKnown RBP3.46□□□□□ -1.86
KNTC1-213ENST00000542727 APOBEC3AP31941 199 aaPredicted RBP3.46□□□□□ -1.86
KNTC1-213ENST00000542727 LSP1P33241 339 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 KPNA1P52294 538 aaPredicted RBP3.46□□□□□ -1.86
KNTC1-213ENST00000542727 ATXN1P54253 815 aaKnown RBP3.46□□□□□ -1.86
KNTC1-213ENST00000542727 TCEA2Q15560 299 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 BEAN1Q3B7T3 259 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 GJC2Q5T442 439 aaPredicted RBP3.46□□□□□ -1.86
KNTC1-213ENST00000542727 ABHD17BQ5VST6 288 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 PDZD4Q76G19 769 aaPredicted RBP3.46□□□□□ -1.86
KNTC1-213ENST00000542727 ZNF610Q8N9Z0 462 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 ZNF768Q9H5H4 540 aaKnown RBP3.46□□□□□ -1.86
KNTC1-213ENST00000542727 WDR26Q9H7D7 661 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 SYBUQ9NX95 663 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 DKK2Q9UBU2 259 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 INSL6Q9Y581 213 aa3.46□□□□□ -1.86
KNTC1-213ENST00000542727 NCR1O76036 304 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 ASMTLO95671 621 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 CFBP00751 764 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 GASTP01350 101 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 LTA4HP09960 611 aaKnown RBP3.45□□□□□ -1.86
KNTC1-213ENST00000542727 ZSCAN20P17040 1043 aaPredicted RBP3.45□□□□□ -1.86
KNTC1-213ENST00000542727 TYRP1P17643 537 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 GUCY1B3Q02153 619 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 APBA1Q02410 837 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 SART3Q15020 963 aaKnown RBP3.45□□□□□ -1.86
KNTC1-213ENST00000542727 C19orf54Q5BKX5 351 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 ZBTB41Q5SVQ8 909 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 PPM1KQ8N3J5 372 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 OR14C36Q8NHC7 312 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 SH3TC2Q8TF17 1288 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 CAVIN3Q969G5 261 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 CDC5LQ99459 802 aaKnown RBP3.45□□□□□ -1.86
KNTC1-213ENST00000542727 FDXACB1Q9BRP7 624 aaPredicted RBP3.45□□□□□ -1.86
KNTC1-213ENST00000542727 WDR11Q9BZH6 1224 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 SYNPO2LQ9H987 977 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 KCNG1Q9UIX4 513 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 USP18Q9UMW8 372 aa3.45□□□□□ -1.86
KNTC1-213ENST00000542727 PIPSLA2A3N6 862 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 PPP1R12AO14974 1030 aaPredicted RBP3.44□□□□□ -1.86
KNTC1-213ENST00000542727 KIAA0355O15063 1070 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 LPXNO60711 386 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 CDK4P11802 303 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 DDX6P26196 483 aaKnown RBP eCLIP3.44□□□□□ -1.86
KNTC1-213ENST00000542727 NEK4P51957 841 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 ELLP55199 621 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms