RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 FTHL17Q9BXU8 183 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 SETD4Q9NVD3 440 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 NRCAMQ92823 1304 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 MICAL3Q7RTP6 2002 aa9.2□□□□□ -0.94
CLPB-211ENST00000542555 PRR23AA6NEV1 266 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 ENPP3O14638 875 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 DGKIO75912 1065 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 PARP1P09874 1014 aaKnown RBP9.19□□□□□ -0.94
CLPB-211ENST00000542555 SNHG28P0DPA3 235 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 GHRP10912 638 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 BRD2P25440 801 aaKnown RBP9.19□□□□□ -0.94
CLPB-211ENST00000542555 MFAP1P55081 439 aaKnown RBP9.19□□□□□ -0.94
CLPB-211ENST00000542555 UBE3AQ05086 875 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 MTMR3Q13615 1198 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 ALX1Q15699 326 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 COX20Q5RI15 118 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 UTP14CQ5TAP6 766 aaKnown RBP9.19□□□□□ -0.94
CLPB-211ENST00000542555 FDX2Q6P4F2 183 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 DGKHQ86XP1 1220 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 NPAS4Q8IUM7 802 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 UBASH3BQ8TF42 649 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 PDCD2LQ9BRP1 358 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 HELLSQ9NRZ9 838 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 FAM13BQ9NYF5 915 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 CLEC1BQ9P126 229 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 PUF60Q9UHX1 559 aaKnown RBP9.19□□□□□ -0.94
CLPB-211ENST00000542555 BARX2Q9UMQ3 279 aaPredicted RBP9.19□□□□□ -0.94
CLPB-211ENST00000542555 HIF3AQ9Y2N7 669 aa9.19□□□□□ -0.94
CLPB-211ENST00000542555 GCOM1H8Y6P7 765 aaPredicted RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 GAS2O43903 313 aaKnown RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 STAM2O75886 525 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 FGRP09769 529 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 POLR2MP0CAP2 368 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 UBA1P22314 1058 aaKnown RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 NBL1P41271 181 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 BMS1Q14692 1282 aaKnown RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 PGM5Q15124 567 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 QRICH1Q2TAL8 776 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 PAN2Q504Q3 1202 aaKnown RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 ZNF318Q5VUA4 2279 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 OGFOD2Q6N063 350 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 CES5AQ6NT32 575 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 TSHZ1Q6ZSZ6 1077 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 ASCL5Q7RTU5 278 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 VSIG10LQ86VR7 867 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 NLRC5Q86WI3 1866 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 ADSSL1Q8N142 457 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 TMEM87AQ8NBN3 555 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 GIMAP8Q8ND71 665 aaPredicted RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 SPPL3Q8TCT6 385 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 KCNG4Q8TDN1 519 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 ZNF689Q96CS4 500 aaPredicted RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 ASIC4Q96FT7 647 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 RASSF4Q9H2L5 321 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 COL20A1Q9P218 1284 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 FNDC3AQ9Y2H6 1198 aaKnown RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 PCDHA1Q9Y5I3 950 aa9.18□□□□□ -0.94
CLPB-211ENST00000542555 MRPL42Q9Y6G3 142 aaKnown RBP9.18□□□□□ -0.94
CLPB-211ENST00000542555 REV3LO60673 3130 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 ZNF213O14771 459 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 FGAP02671 866 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 ITGB1P05556 798 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 IBSPP21815 317 aaPredicted RBP9.17□□□□□ -0.94
CLPB-211ENST00000542555 HSD17B4P51659 736 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 HAND2P61296 217 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 TRIP4Q15650 581 aaPredicted RBP9.17□□□□□ -0.94
CLPB-211ENST00000542555 MCMDC2Q4G0Z9 681 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 ODR4Q5SWX8 454 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 METTL7BQ6UX53 244 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 FAM43BQ6ZT52 329 aaPredicted RBP9.17□□□□□ -0.94
CLPB-211ENST00000542555 ADGRD2Q7Z7M1 963 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 THNSL1Q8IYQ7 743 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 KREMEN2Q8NCW0 462 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 FAM200AQ8TCP9 573 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 FOXD4L4Q8WXT5 416 aaPredicted RBP9.17□□□□□ -0.94
CLPB-211ENST00000542555 EVI5LQ96CN4 794 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 KLHDC7BQ96G42 594 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 ZKSCAN3Q9BRR0 538 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 DCTPP1Q9H773 170 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 SH2B1Q9NRF2 756 aaPredicted RBP9.17□□□□□ -0.94
CLPB-211ENST00000542555 SORCS3Q9UPU3 1222 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 PCDHB7Q9Y5E2 793 aa9.17□□□□□ -0.94
CLPB-211ENST00000542555 KIAA1217Q5T5P2 1943 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 PER2O15055 1255 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 FIBPO43427 364 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 CHRNA1P02708 482 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 HOXB8P17481 243 aaPredicted RBP9.16□□□□□ -0.94
CLPB-211ENST00000542555 EPHA1P21709 976 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 RFX1P22670 979 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 HOXC8P31273 242 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 TECP42680 631 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 PREPP48147 710 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 SP4Q02446 784 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 PPFIA1Q13136 1202 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 PAK2Q13177 524 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 LPIN1Q14693 890 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 VPS53Q5VIR6 699 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 RUFY4Q6ZNE9 571 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 STOX1Q6ZVD7 989 aa9.16□□□□□ -0.94
CLPB-211ENST00000542555 CYFIP1Q7L576 1253 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms