RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 CXCL14O95715 111 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 ARF4P18085 180 aaPredicted RBP17.34■□□□□ 0.37
VPS33A-206ENST00000542310 ATP2B1P20020 1258 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 GNL2Q13823 731 aaKnown RBP17.34■□□□□ 0.37
VPS33A-206ENST00000542310 PTPN14Q15678 1187 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 PPFIBP1Q86W92 1011 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 ZNF280BQ86YH2 543 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 EIF2AQ9BY44 585 aaKnown RBP17.34■□□□□ 0.37
VPS33A-206ENST00000542310 TRIM6Q9C030 488 aaPredicted RBP17.34■□□□□ 0.37
VPS33A-206ENST00000542310 GBP3Q9H0R5 595 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 KCNH6Q9H252 994 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 ADAM7Q9H2U9 754 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 GIT1Q9Y2X7 761 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 TRIOO75962 3097 aa17.34■□□□□ 0.37
VPS33A-206ENST00000542310 DDHD2O94830 711 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 CA8P35219 290 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 FXR2P51116 673 aaKnown RBP eCLIP17.33■□□□□ 0.36
VPS33A-206ENST00000542310 DSC1Q08554 894 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 FAM187BQ17R55 369 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 CES5AQ6NT32 575 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 SLC27A1Q6PCB7 646 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 TMEM87AQ8NBN3 555 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 EDAQ92838 391 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 CPB2Q96IY4 423 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 VN1R3Q9BXE9 311 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 C2orf40Q9H1Z8 148 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 PRMT7Q9NVM4 692 aaPredicted RBP17.33■□□□□ 0.36
VPS33A-206ENST00000542310 FAN1Q9Y2M0 1017 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 NR2E1Q9Y466 385 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 STK24Q9Y6E0 443 aa17.33■□□□□ 0.36
VPS33A-206ENST00000542310 ARL5CA6NH57 179 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 LRRIQ4A6NIV6 560 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 POMCP01189 267 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 ALDH2P05091 517 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 U2AF2P26368 475 aaKnown RBP eCLIP17.32■□□□□ 0.36
VPS33A-206ENST00000542310 MLH1P40692 756 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 MTHFRP42898 656 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 AFF1P51825 1210 aaKnown RBP17.32■□□□□ 0.36
VPS33A-206ENST00000542310 RABEP1Q15276 862 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 ZNF174Q15697 407 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 POTEGQ6S5H5 508 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 ZBTB8OSQ8IWT0 167 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 COLGALT2Q8IYK4 626 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 RPGRIP1Q96KN7 1286 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 HERC2P3Q9BVR0 1158 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 EMILIN2Q9BXX0 1053 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 MARCH5Q9NX47 278 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 SSX2IPQ9Y2D8 614 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
VPS33A-206ENST00000542310 C2orf16Q68DN1 1984 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 PLXNA3P51805 1871 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 A0A1B0GUA9 196 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 ARHGEF35A5YM69 484 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 NRP1O14786 923 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 SOD2P04179 222 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 KIAA1841Q6NSI8 718 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 BMP8AQ7Z5Y6 402 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 RNF168Q8IYW5 571 aaPredicted RBP17.31■□□□□ 0.36
VPS33A-206ENST00000542310 SLC22A17Q8WUG5 538 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 AUTS2Q8WXX7 1259 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 RIPOR3Q96MK2 946 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 GAD1Q99259 594 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 RAB34Q9BZG1 259 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 NXF3Q9H4D5 531 aaKnown RBP17.31■□□□□ 0.36
VPS33A-206ENST00000542310 SFXN1Q9H9B4 322 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 GPRC5CQ9NQ84 441 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 MTCL1Q9Y4B5 1905 aaKnown RBP17.31■□□□□ 0.36
VPS33A-206ENST00000542310 KMT2EQ8IZD2 1858 aa17.31■□□□□ 0.36
VPS33A-206ENST00000542310 LAD1O00515 517 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 B4GALT5O43286 388 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 ST18O60284 1047 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 EFEMP2O95967 443 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 URODP06132 367 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 CYP11B2P19099 503 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 NAMPTP43490 491 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 ZXDAP98168 799 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 GRIK3Q13003 919 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 PADI6Q6TGC4 694 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 C4orf32Q8N8J7 132 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 MFSD14AQ96MC6 490 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 FZD8Q9H461 694 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 MRPL17Q9NRX2 175 aaKnown RBP17.3■□□□□ 0.36
VPS33A-206ENST00000542310 HES2Q9Y543 173 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 MUC6Q6W4X9 2439 aa17.3■□□□□ 0.36
VPS33A-206ENST00000542310 N4BP3O15049 544 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 LILRB3O75022 631 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 NR1I2O75469 434 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 NPTXRO95502 500 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 EPCAMP16422 314 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 SCNN1GP51170 649 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 CLCN4P51793 760 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 PDIA5Q14554 519 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 PTPN21Q16825 1174 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 TRIM67Q6ZTA4 783 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 HFE2Q6ZVN8 426 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 GPR65Q8IYL9 337 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 IGSF22Q8N9C0 903 aa17.29■□□□□ 0.36
VPS33A-206ENST00000542310 ZFP42Q96MM3 310 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms