RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 POU5F1Q01860 360 aaKnown RBP16.49■□□□□ 0.23
CNOT9-208ENST00000542068 MAP2K1Q02750 393 aaPredicted RBP16.49■□□□□ 0.23
CNOT9-208ENST00000542068 ZDHHC24Q6UX98 284 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
CNOT9-208ENST00000542068 ZDHHC14Q8IZN3 488 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 FAM20AQ96MK3 541 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 STK33Q9BYT3 514 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 ZDHHC18Q9NUE0 388 aa16.49■□□□□ 0.23
CNOT9-208ENST00000542068 RASGRF2O14827 1237 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 TMEM253P0C7T8 217 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 SREBF1P36956 1147 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 EPM2AIP1Q7L775 607 aaPredicted RBP16.48■□□□□ 0.23
CNOT9-208ENST00000542068 PRELID2Q8N945 189 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 C1orf131Q8NDD1 294 aaKnown RBP16.48■□□□□ 0.23
CNOT9-208ENST00000542068 LENG9Q96B70 501 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 MRRFQ96E11 262 aaKnown RBP16.48■□□□□ 0.23
CNOT9-208ENST00000542068 FAM84AQ96KN4 292 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 ZNF341Q9BYN7 854 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 TESPA1A2RU30 521 aaPredicted RBP16.48■□□□□ 0.23
CNOT9-208ENST00000542068 TCP11X1B4DZS4 312 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 IPO5O00410 1097 aaKnown RBP16.48■□□□□ 0.23
CNOT9-208ENST00000542068 SLITRK3O94933 977 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 DLATP10515 647 aaKnown RBP16.48■□□□□ 0.23
CNOT9-208ENST00000542068 KCNJ2P63252 427 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 MIER3Q7Z3K6 550 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 ZSWIM2Q8NEG5 633 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 TLCD1Q96CP7 247 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 CNOT10Q9H9A5 744 aaKnown RBP16.48■□□□□ 0.23
CNOT9-208ENST00000542068 MTRF1LQ9UGC7 380 aaKnown RBP16.48■□□□□ 0.23
CNOT9-208ENST00000542068 MCM8Q9UJA3 840 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 RPTORQ8N122 1335 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 PYGMP11217 842 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 GJC1P36383 396 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 NOVP48745 357 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 PRKG1Q13976 671 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 C2CD6Q53TS8 623 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 TRIM33Q9UPN9 1127 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 AGAP1Q9UPQ3 857 aa16.48■□□□□ 0.23
CNOT9-208ENST00000542068 UBOX5O94941 541 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 EIF3BP55884 814 aaKnown RBP16.47■□□□□ 0.23
CNOT9-208ENST00000542068 DRP2Q13474 957 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 PLCB4Q15147 1175 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 CEP55Q53EZ4 464 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 LDHDQ86WU2 507 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 ARHGEF19Q8IW93 802 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 RAVER2Q9HCJ3 691 aaKnown RBP16.47■□□□□ 0.23
CNOT9-208ENST00000542068 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.47■□□□□ 0.231e-6■■□□□ 13.3
CNOT9-208ENST00000542068 ASIC3Q9UHC3 531 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 FZD1Q9UP38 647 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 A8MUI8 341 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 ATP6V1G2O95670 118 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 EYA4O95677 639 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 SEL1L2Q5TEA6 688 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 NUGGCQ68CJ6 796 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 SLC30A5Q8TAD4 765 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 ATG4AQ8WYN0 398 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
CNOT9-208ENST00000542068 AGPAT1Q99943 283 aa16.47■□□□□ 0.23
CNOT9-208ENST00000542068 EMSYQ7Z589 1322 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 PPATQ06203 517 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 EPC2Q52LR7 807 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 DAB2IPQ5VWQ8 1189 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 UBL4BQ8N7F7 174 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 KIFC3Q9BVG8 833 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 WDR11Q9BZH6 1224 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 SLC24A3Q9HC58 644 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 APEX2Q9UBZ4 518 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 HIP1RO75146 1068 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 EN1Q05925 392 aaPredicted RBP16.46■□□□□ 0.23
CNOT9-208ENST00000542068 TRPM8Q7Z2W7 1104 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 PPM1KQ8N3J5 372 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 CHURC1Q8WUH1 139 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 ATXN2LQ8WWM7 1075 aaKnown RBP16.46■□□□□ 0.23
CNOT9-208ENST00000542068 ZNF317Q96PQ6 595 aaPredicted RBP16.46■□□□□ 0.23
CNOT9-208ENST00000542068 CARD9Q9H257 536 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 UNC45AQ9H3U1 944 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 GRHL1Q9NZI5 618 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 WRAP73Q9P2S5 460 aaPredicted RBP16.46■□□□□ 0.23
CNOT9-208ENST00000542068 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 PLIN4Q96Q06 1357 aa16.46■□□□□ 0.23
CNOT9-208ENST00000542068 C5orf60A6NFR6 353 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 NFIBO00712 420 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 CLDN3O15551 220 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 SGPL1O95470 568 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 HP1BP3Q5SSJ5 553 aaPredicted RBP16.46■□□□□ 0.22
CNOT9-208ENST00000542068 CAPN12Q6ZSI9 719 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 OTOP1Q7RTM1 612 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.22
CNOT9-208ENST00000542068 CNKSR1Q969H4 720 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 MKL1Q969V6 931 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 AGPAT3Q9NRZ7 376 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 PNMA3Q9UL41 463 aa16.46■□□□□ 0.22
CNOT9-208ENST00000542068 RREB1Q92766 1687 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 A0A0A6YYK5 440 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms