RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 RNASELQ05823 741 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 PTGDRQ13258 359 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 PKP1Q13835 747 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 ARL6IP4Q66PJ3 421 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 MIER3Q7Z3K6 550 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 GPR149Q86SP6 731 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 PPFIBP1Q86W92 1011 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 SLC22A17Q8WUG5 538 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 LPPQ93052 612 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 TTC12Q9H892 705 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 DISC1Q9NRI5 854 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 DACT1Q9NYF0 836 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 RBM19Q9Y4C8 960 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 MORC2Q9Y6X9 1032 aaPredicted RBP9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 MYO15AQ9UKN7 3530 aa9.69□□□□□ -0.86
CLSTN3-212ENST00000541770 A0A0U1RQF3 1178 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 EML1O00423 815 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 TXKP42681 527 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 GPC3P51654 580 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 PDIA5Q14554 519 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 EPHA7Q15375 998 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 SF3A1Q15459 793 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 ATL3Q6DD88 541 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 TWF2Q6IBS0 349 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 DDX53Q86TM3 631 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 RSAD2Q8WXG1 361 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 IGSF21Q96ID5 467 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 EMILIN2Q9BXX0 1053 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 ADAMTS10Q9H324 1103 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 NRDE2Q9H7Z3 1164 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 ZDHHC9Q9Y397 364 aa9.68□□□□□ -0.86
CLSTN3-212ENST00000541770 PTPRZ1P23471 2315 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 MIA3Q5JRA6 1907 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 C2CD2LO14523 706 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 CHMP2AO43633 222 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 DKC1O60832 514 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 OATP04181 439 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 P4HBP07237 508 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 DCNP07585 359 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 GALTP07902 379 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 DARSP14868 501 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 POLGP54098 1239 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 NUCB2P80303 420 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 PUM1Q14671 1186 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 PTPAQ15257 358 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 PTPN14Q15678 1187 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 NOMO2Q5JPE7 1267 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 FAM173BQ6P4H8 233 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 GLB1LQ6UWU2 654 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 DTHD1Q6ZMT9 781 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 ZNF598Q86UK7 904 aaKnown RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 DCLK2Q8N568 766 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 IGSF22Q8N9C0 903 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 BCL7CQ8WUZ0 217 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 FAM167AQ96KS9 214 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 ZNF396Q96N95 335 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 KLHL5Q96PQ7 755 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 FAM193BQ96PV7 902 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 GCOM2Q9BZD3 368 aaPredicted RBP9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 RAB34Q9BZG1 259 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 SEMA4AQ9H3S1 761 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 NRBP2Q9NSY0 501 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 TBC1D13Q9NVG8 400 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 IGSF9Q9P2J2 1179 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 DNAJB4Q9UDY4 337 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 ATP6V1DQ9Y5K8 247 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
CLSTN3-212ENST00000541770 KRBA1A5PL33 1030 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 MEIS3P2A8K0S8 358 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 ZNF862O60290 1169 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 YEATS4O95619 227 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 CNPP09543 421 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 MUTP22033 750 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 PHKA2P46019 1235 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 QARSP47897 775 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 SLC11A1P49279 550 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 CLCN4P51793 760 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 PSMC5P62195 406 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 PRKCEQ02156 737 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 TBC1D8BQ0IIM8 1120 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 MTERF2Q49AM1 385 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 NCAPH2Q6IBW4 605 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 ZC3H14Q6PJT7 736 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 C4orf19Q8IY42 314 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 ST13P5Q8NFI4 369 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 URGCPQ8TCY9 931 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 USP28Q96RU2 1077 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 HSD17B14Q9BPX1 270 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 EIF2AK1Q9BQI3 630 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 TBC1D17Q9HA65 648 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 MAN1C1Q9NR34 630 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 MRPL17Q9NRX2 175 aaKnown RBP9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 FAM105AQ9NUU6 356 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 WNT16Q9UBV4 365 aa9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 SEPT9Q9UHD8 586 aaPredicted RBP9.66□□□□□ -0.86
CLSTN3-212ENST00000541770 CIZ1Q9ULV3 898 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms