RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 ZNF449Q6P9G9 518 aa15.5■□□□□ 0.07
GCFC2-211ENST00000541687 APTXQ7Z2E3 356 aaKnown RBP15.5■□□□□ 0.07
GCFC2-211ENST00000541687 KCNG1Q9UIX4 513 aa15.5■□□□□ 0.07
GCFC2-211ENST00000541687 MEFVO15553 781 aaPredicted RBP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 PRLRP16471 622 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 POLR2BP30876 1174 aaKnown RBP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 PEX19P40855 299 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 SNRNP35Q16560 246 aaKnown RBP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 LONRF1Q17RB8 773 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 TMEM119Q4V9L6 283 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 SDCCAG8Q86SQ7 713 aaPredicted RBP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 LMNTD2Q8IXW0 634 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 RILPQ96NA2 401 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 WRNIP1Q96S55 665 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 TXNDC9O14530 226 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 BRAFP15056 766 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 KRT17Q04695 432 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 PPP2R5AQ15172 486 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 MEI1Q5TIA1 1274 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 SLC20A1Q8WUM9 679 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 TRIM11Q96F44 468 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 DIS3Q9Y2L1 958 aaKnown RBP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 CSADQ9Y600 493 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 TMEM150BA6NC51 233 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 ZNF263O14978 683 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 ITIH3Q06033 890 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 BAATQ14032 418 aaPredicted RBP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 CDO1Q16878 200 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 CERS5Q8N5B7 392 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 BBOF1Q8ND07 529 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 SLC17A8Q8NDX2 589 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 CCDC110Q8TBZ0 833 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 C9orf72Q96LT7 481 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 POP1Q99575 1024 aaKnown RBP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 VCPKMTQ9H867 229 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 RASA4BC9J798 803 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 TLR3O15455 904 aaKnown RBP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 RASA4O43374 803 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 TROVE2P10155 538 aaKnown RBP eCLIP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 JAK3P52333 1124 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 MTMR2Q13614 643 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 SLC29A2Q14542 456 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 ARHGEF18Q6ZSZ5 1173 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.49■□□□□ 0.07
GCFC2-211ENST00000541687 HVCN1Q96D96 273 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 CHMP6Q96FZ7 201 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 ODF2LQ9ULJ1 636 aa15.49■□□□□ 0.07
GCFC2-211ENST00000541687 TMEM253P0C7T8 217 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 MAN1A1P33908 653 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 SREBF1P36956 1147 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 KRT76Q01546 638 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 SESTD1Q86VW0 696 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 TMEM143Q96AN5 459 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 DNAJC19Q96DA6 116 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 APOL6Q9BWW8 343 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 CPSF2Q9P2I0 782 aaKnown RBP15.48■□□□□ 0.07
GCFC2-211ENST00000541687 RTN2O75298 545 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 DDR1Q08345 913 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 APOBEC3HQ6NTF7 200 aaKnown RBP15.48■□□□□ 0.07
GCFC2-211ENST00000541687 CCDC62Q6P9F0 684 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 RAB3IL1Q8TBN0 382 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 C18orf8Q96DM3 657 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 POLR3FQ9H1D9 316 aaPredicted RBP15.48■□□□□ 0.07
GCFC2-211ENST00000541687 ZNF70Q9UC06 446 aaPredicted RBP15.48■□□□□ 0.07
GCFC2-211ENST00000541687 PCSK1NQ9UHG2 260 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 CHN1P15882 459 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 GUCY2CP25092 1073 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 PHBP35232 272 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 CBWD2Q8IUF1 395 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 PRMT1Q99873 361 aaKnown RBP15.48■□□□□ 0.07
GCFC2-211ENST00000541687 ATP6V0A4Q9HBG4 840 aa15.48■□□□□ 0.07
GCFC2-211ENST00000541687 FAM187AA6NFU0 413 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 TISP43B9A030 160 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 GRM1Q13255 1194 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 SYCP2LQ5T4T6 812 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 ERP44Q9BS26 406 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 PCDHA10Q9Y5I2 948 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 FANCGO15287 622 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 GNA15P30679 374 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 TRADDQ15628 312 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 ARMC9Q7Z3E5 817 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 MCPH1Q8NEM0 835 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 SLC35C1Q96A29 364 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 POLR3CQ9BUI4 534 aaPredicted RBP15.47■□□□□ 0.07
GCFC2-211ENST00000541687 RPAP3Q9H6T3 665 aaPredicted RBP15.47■□□□□ 0.07
GCFC2-211ENST00000541687 SUCLA2Q9P2R7 463 aaPredicted RBP15.47■□□□□ 0.07
GCFC2-211ENST00000541687 SGPL1O95470 568 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 SYF2O95926 243 aaKnown RBP15.47■□□□□ 0.07
GCFC2-211ENST00000541687 HMGCS2P54868 508 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 ERICH1Q86X53 443 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 C7orf31Q8N865 590 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 SMC1BQ8NDV3 1235 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 BAP1Q92560 729 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 MXRA8Q9BRK3 442 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 TMEM117Q9H0C3 514 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 WNT8AQ9H1J5 351 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 SPAG7O75391 227 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 ERVK-9P63128 1117 aa15.47■□□□□ 0.07
GCFC2-211ENST00000541687 SARNPP82979 210 aaKnown RBP15.47■□□□□ 0.07
GCFC2-211ENST00000541687 RTKN2Q8IZC4 609 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms