RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 NOCTQ9UK39 431 aaKnown RBP14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 BCS1LQ9Y276 419 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 UTP11Q9Y3A2 253 aaKnown RBP14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 ALG6Q9Y672 507 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 NFS1Q9Y697 457 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 DOCK1Q14185 1865 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 DAPK3O43293 454 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 MTA2O94776 668 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 ADSSP30520 456 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 SMTNP53814 917 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 MTMR2Q13614 643 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 MTMR3Q13615 1198 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 SNRNP35Q16560 246 aaKnown RBP14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 ARHGEF16Q5VV41 709 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 ZNF746Q6NUN9 644 aaPredicted RBP14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 EPS8L1Q8TE68 723 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 ALG3Q92685 438 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 KAT5Q92993 513 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 RAB17Q9H0T7 212 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 CTTNBP2NLQ9P2B4 639 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 COQ4Q9Y3A0 265 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 NR2E1Q9Y466 385 aa14.31□□□□□ -0.12
PRKAB1-206ENST00000541640 GOLGA6L10A0A0M3HER8 536 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 ANKRD63C9JTQ0 380 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 VWA5AO00534 786 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 SGPL1O95470 568 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 CHRNB2P17787 502 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 NPTX2P47972 431 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 MFAP3P55082 362 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 DNAJC21Q5F1R6 531 aaKnown RBP14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 CEP85LQ5SZL2 805 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 KRT39Q6A163 491 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 ANO5Q75V66 913 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 NOP9Q86U38 636 aaKnown RBP14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 CBWD2Q8IUF1 395 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 SHC3Q92529 594 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 GPRASP2Q96D09 838 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 KREMEN1Q96MU8 473 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 RPS6KC1Q96S38 1066 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 PCDHB18PQ96TA0 734 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 NTPCRQ9BSD7 190 aaKnown RBP14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 MOV10L1Q9BXT6 1211 aaKnown RBP14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 CELF4Q9BZC1 486 aaKnown RBP14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 TESPA1A2RU30 521 aaPredicted RBP14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 GOLGA8IPA6NC78 632 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 GOLGA8JA6NMD2 632 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 MAFGO15525 162 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 NR1D1P20393 614 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 DMP1Q13316 513 aaPredicted RBP14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 NSMFQ6X4W1 530 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 UBL4BQ8N7F7 174 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 TMC2Q8TDI7 906 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 BCAS4Q8TDM0 211 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 MORC4Q8TE76 937 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 PARD3BQ8TEW8 1205 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 SPIRE2Q8WWL2 714 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 FBXL18Q96ME1 805 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 C17orf75Q9HAS0 396 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 TMEM8AQ9HCN3 771 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 PCDHA10Q9Y5I2 948 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 SYNGAP1Q96PV0 1343 aa14.3□□□□□ -0.12
PRKAB1-206ENST00000541640 GOLGB1Q14789 3259 aaKnown RBP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 FAM187AA6NFU0 413 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 GOLGA6L10A6NI86 522 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 CCDC169A6NNP5 214 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 HSPA6P17066 643 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 CNGA1P29973 690 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 CCND2P30279 289 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 USP8P40818 1118 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 GPC3P51654 580 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 MAP2K1Q02750 393 aaPredicted RBP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 PRPF4BQ13523 1007 aaKnown RBP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 TMC3Q7Z5M5 1100 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 VSIG10LQ86VR7 867 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 NLGN2Q8NFZ4 835 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 KIFAP3Q92845 792 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 SEMA4DQ92854 862 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 FEZ2Q9UHY8 353 aaPredicted RBP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 COL11A1P12107 1806 aaPredicted RBP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 RLFQ13129 1914 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 EGFRP00533 1210 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 CTNNA1P35221 906 aaKnown RBP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 FLT3P36888 993 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 DR1Q01658 176 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 ENPEPQ07075 957 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 PDCLQ13371 301 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 BAATQ14032 418 aaPredicted RBP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 DHX34Q14147 1143 aaKnown RBP14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 SPDYCQ5MJ68 293 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 NAA35Q5VZE5 725 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 OTUD6AQ7L8S5 288 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 NLRX1Q86UT6 975 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 PPM1KQ8N3J5 372 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 HELQQ8TDG4 1101 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 ATP8B4Q8TF62 1192 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 JDP2Q8WYK2 163 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 MFSD14AQ96MC6 490 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 ZSWIM1Q9BR11 485 aa14.29□□□□□ -0.12
PRKAB1-206ENST00000541640 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms