RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 RPS17P08708 135 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 KRT7P08729 469 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RSPH10BP0C881 870 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RPS2P15880 293 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ZNF3P17036 446 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 PRKACAP17612 351 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 DRD4P21917 467 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 CDH3P22223 829 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RPL9P32969 192 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TXKP42681 527 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 GPD2P43304 727 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 HAAOP46952 286 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 EIF2B2P49770 351 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 BCAP31P51572 246 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 HNRNPMP52272 730 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 EIF3BP55884 814 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TBX4P57082 545 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 SRP54P61011 504 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 IRX4P78413 519 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 GUCY1A3Q02108 690 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RELQ04864 619 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 PDE4DQ08499 809 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 FCHO2Q0JRZ9 810 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 SCRN3Q0VDG4 424 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 AP1B1Q10567 949 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TBX2Q13207 712 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TRIM14Q14142 442 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 GNA13Q14344 377 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 CYTH1Q15438 398 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 NFE2Q16621 373 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 GALNTL6Q49A17 601 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 FBXO43Q4G163 708 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 AKAP4Q5JQC9 854 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 WDR44Q5JSH3 913 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ARMC4Q5T2S8 1044 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 PAPD7Q5XG87 772 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TSHZ3Q63HK5 1081 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 C1orf228Q6PIY5 440 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 DHRS4L2Q6PKH6 230 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ANGPTL8Q6UXH0 198 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ZNF600Q6ZNG1 722 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TRAPPC11Q7Z392 1133 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TTC6Q86TZ1 520 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TREML1Q86YW5 311 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 CNGA4Q8IV77 575 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 PDZD8Q8NEN9 1154 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 LILRB4Q8NHJ6 448 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 LRRC8CQ8TDW0 803 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RAPGEF4Q8WZA2 1011 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 SGK3Q96BR1 496 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ZNF775Q96BV0 537 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 INTS12Q96CB8 462 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 GRAMD1AQ96CP6 724 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 C11orf24Q96F05 449 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 PGBD1Q96JS3 809 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 LRGUKQ96M69 825 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RPRD1AQ96P16 312 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 GAL3ST1Q99999 423 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 BCL2L13Q9BXK5 485 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 MRPL9Q9BYD2 267 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RHOBTB2Q9BYZ6 727 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TM6SF1Q9BZW5 370 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 EHD4Q9H223 541 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 HAUS4Q9H6D7 363 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RUBCNLQ9H714 662 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 IFT22Q9H7X7 185 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ECT2Q9H8V3 914 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 KMT5AQ9NQR1 393 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ETNK2Q9NVF9 386 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 C9orf78Q9NZ63 289 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 STMN3Q9NZ72 180 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 EHD2Q9NZN4 543 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 HMGXB4Q9UGU5 601 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ANGPTL2Q9UKU9 493 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 DMTF1Q9Y222 760 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TMEM5Q9Y2B1 443 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 DNAJC16Q9Y2G8 782 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 COQ6Q9Y2Z9 468 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 HEY1Q9Y5J3 304 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 SLC4A4Q9Y6R1 1079 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 PNPLA6Q8IY17 1366 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 NESP48681 1621 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 MROH7-TTC4A0A0A0MT08 1334 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 ZNF536O15090 1300 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 MAP3K15Q6ZN16 1313 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 OVOS2A0A0G2JMS6 1433 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 OVOS2A0A0J9YW53 1432 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 PTPRTO14522 1441 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 OVOS2Q6IE36 1432 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 A0A1W2PQ27 194 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 A0A1W2PQ64 194 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 A0A1W2PQD8 194 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 FUOMA2VDF0 154 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 OR5K4A6NMS3 321 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 ZNF862O60290 1169 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 GDF9O60383 454 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 TMCC2O75069 709 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 SEC24DO94855 1032 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-218ENST00000541615 ARHGEF15O94989 841 aa5.52□□□□□ -1.53
SNHG1-218ENST00000541615 OR5F1O95221 314 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms