RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 POLR1AO95602 1720 aaPredicted RBP15.87■□□□□ 0.13
SMARCA4-207ENST00000541122 WDR17Q8IZU2 1322 aa15.87■□□□□ 0.13
SMARCA4-207ENST00000541122 GOLGA8MH3BSY2 632 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 ENO1P06733 434 aaKnown RBP15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 HSD17B3P37058 310 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 STK33Q9BYT3 514 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 NBPF3Q9H094 633 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 PNPLA7Q6ZV29 1317 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 FCER1AP12319 257 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 AARSP49588 968 aaKnown RBP eCLIP15.86■□□□□ 0.133e-6■□□□□ 9.5
SMARCA4-207ENST00000541122 USP11P51784 963 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 ROR1Q01973 937 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 MSTO1Q9BUK6 570 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 PHF20Q9BVI0 1012 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 KYNUQ16719 465 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 ARL13BQ3SXY8 428 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 DCAF15Q66K64 600 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 OR2W6PQ8NHA6 318 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 NPHS2Q9NP85 383 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 GTSE1Q9NYZ3 720 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 ZFATQ9P243 1243 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 ORC4O43929 436 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 CCND2P30279 289 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 YWHAHQ04917 246 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 GIMAP8Q8ND71 665 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 TMEM47Q9BQJ4 181 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 PALMDQ9NP74 551 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 SEC31BQ9NQW1 1179 aa15.86■□□□□ 0.13
SMARCA4-207ENST00000541122 LRRIQ3A6PVS8 624 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 PIK3R2O00459 728 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 SPAG6O75602 509 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 ARSEP51690 589 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 ADRM1Q16186 407 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 LONRF1Q17RB8 773 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 C16orf89Q6UX73 402 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 CAVIN3Q969G5 261 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 NSL1Q96IY1 281 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 RAB21Q9UL25 225 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 ARHGEF40Q8TER5 1519 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 MROH7-TTC4A0A0A0MT08 1334 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 SPDYE16A6NNV3 312 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 H3BQF6 201 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 INPP5AQ14642 412 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 CEP55Q53EZ4 464 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 MCPH1Q8NEM0 835 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 TMBIM4Q9HC24 238 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 UBN1Q9NPG3 1134 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 C16orf96A6NNT2 1141 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 DAB1O75553 588 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 KDSRQ06136 332 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 SLC35G2Q8TBE7 412 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 RBM15Q96T37 977 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■■■□ 21.5
SMARCA4-207ENST00000541122 LRRC4Q9HBW1 653 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 METP08581 1390 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 H3BRJ5 948 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 TMEM253P0C7T8 217 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 GALCP54803 685 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 KIF2BQ8N4N8 673 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 DNAJC7Q99615 494 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
SMARCA4-207ENST00000541122 ECM2O94769 699 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 TRPC1P48995 793 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 SERPINB9P50453 376 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 SCNN1DP51172 638 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 PEX3P56589 373 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 UBXN2AP68543 259 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 SLC12A1Q13621 1099 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 CCDC24Q8N4L8 307 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 ANKS1AQ92625 1134 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 HEXIM2Q96MH2 286 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 SEPT3Q9UH03 358 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 INO80B-WBP1J3KQ70 363 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 ANP32DO95626 131 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 TMED10P49755 219 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 CDK17Q00537 523 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 EDRF1Q3B7T1 1238 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 ZNF667Q5HYK9 610 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 KIAA2013Q8IYS2 634 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 INO80BQ9C086 356 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 DBR1Q9UK59 544 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 CYTH1Q15438 398 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 RCOR2Q8IZ40 523 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 DDI1Q8WTU0 396 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 RPS6KC1Q96S38 1066 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 NGRNQ9NPE2 291 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 PARVAQ9NVD7 372 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 PCDHA6Q9UN73 950 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 PCDHA8Q9Y5H6 950 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 CFAP65Q6ZU64 1925 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 POTEB3A0JP26 581 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 POTECB2RU33 542 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 MAP4P27816 1152 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 SLC44A4Q53GD3 710 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 POTEBQ6S5H4 581 aa15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 MYLK4Q86YV6 388 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 BSDC1Q9NW68 430 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-207ENST00000541122 PP2D1A8MPX8 630 aa15.83■□□□□ 0.13
SMARCA4-207ENST00000541122 K7ERI5 159 aa15.83■□□□□ 0.13
SMARCA4-207ENST00000541122 ALDH18A1P54886 795 aaKnown RBP15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms