RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 IGF2BP3O00425 579 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 TP73O15350 636 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 SPOPO43791 374 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 MGRN1O60291 552 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 ALDH5A1P51649 535 aaPredicted RBP11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 KYNUQ16719 465 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 LACTB2Q53H82 288 aaPredicted RBP11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 NUGGCQ68CJ6 796 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 CAPN12Q6ZSI9 719 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 FAM47EQ6ZV65 393 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 EIF1ADQ8N9N8 165 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 SLC17A8Q8NDX2 589 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 NSMCE1Q8WV22 266 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.15□□□□□ -0.627e-9■■■■■ 72.6
CDC42SE1-207ENST00000540998 SPOCK2Q92563 424 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 CCDC127Q96BQ5 260 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 MBOAT7Q96N66 472 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 ZSWIM1Q9BR11 485 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 KIFC3Q9BVG8 833 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 AMNQ9BXJ7 453 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 HEMGNQ9BXL5 484 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 CDC42EP4Q9H3Q1 356 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 GPRC5CQ9NQ84 441 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 AAASQ9NRG9 546 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 CHST7Q9NS84 486 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 SAMD15Q9P1V8 674 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 GGA2Q9UJY4 613 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 SCAF8Q9UPN6 1271 aaKnown RBP11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 FRMD4BQ9Y2L6 1034 aa11.15□□□□□ -0.62
CDC42SE1-207ENST00000540998 TAF1LQ8IZX4 1826 aa11.15□□□□□ -0.63
CDC42SE1-207ENST00000540998 FRMPD4Q14CM0 1322 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 ANKRD62A6NC57 917 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 SLC16A3O15427 465 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 GH2P01242 217 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 NUDT17P0C025 328 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 GJC1P36383 396 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 MTM1Q13496 603 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 BMT2Q1RMZ1 405 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 RBM26Q5T8P6 1007 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 ZNF720Q7Z2F6 126 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 PIGWQ7Z7B1 504 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 DAW1Q8N136 415 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 PPM1KQ8N3J5 372 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 LMO3Q8TAP4 145 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 HSD17B14Q9BPX1 270 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 SWAP70Q9UH65 585 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 USP20Q9Y2K6 914 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 COL24A1Q17RW2 1714 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 IGLV3-22A0A075B6J6 115 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 HIP1RO75146 1068 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 KRT16P08779 473 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 GBP2P32456 591 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 SREBF1P36956 1147 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 MAP2K1Q02750 393 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 BFSP1Q12934 665 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 DRP2Q13474 957 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 HS2ST1Q7LGA3 356 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 OTOP1Q7RTM1 612 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 PAIP2Q9BPZ3 127 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 ECT2Q9H8V3 914 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 SLC12A4Q9UP95 1085 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 CCDC169A6NNP5 214 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 K7ENM7 598 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 PEX5P50542 639 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 NCALDP61601 193 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 ARHGEF2Q92974 986 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 SAAL1Q96ER3 474 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 NUP85Q9BW27 656 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 CNOT10Q9H9A5 744 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 ARHGEF10LQ9HCE6 1279 aa11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 R3HDM2Q9Y2K5 976 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-207ENST00000540998 DNAJC8O75937 253 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 MYBL1P10243 752 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 GYS1P13807 737 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 EZRP15311 586 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 NPEPPSP55786 919 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 SOX10P56693 466 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 ANKS4BQ8N8V4 417 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 TBC1D22AQ8WUA7 517 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 PGM2Q96G03 612 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 PI4K2AQ9BTU6 479 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 UNC45AQ9H3U1 944 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 KLHL11Q9NVR0 708 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 FAM198AQ9UFP1 575 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 ASIC3Q9UHC3 531 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 KIF13BQ9NQT8 1826 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 SNX3O60493 162 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 CLSTN1O94985 981 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 EIF3BP55884 814 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 KRT17Q04695 432 aa11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 SIX1Q15475 284 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE1-207ENST00000540998 Q4G0T1 1027 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms