RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 DLG4P78352 724 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 PTK2Q05397 1052 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 CETN1Q12798 172 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 MFSD4BQ5TF39 518 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 PAPD7Q5XG87 772 aaKnown RBP10.47□□□□□ -0.73
CLIP1-212ENST00000540304 GJB7Q6PEY0 223 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 SHCBP1Q8NEM2 672 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 AFAP1L1Q8TED9 768 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 ARHGAP28Q9P2N2 729 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 APEX2Q9UBZ4 518 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 MYH10P35580 1976 aa10.47□□□□□ -0.73
CLIP1-212ENST00000540304 SOCS7O14512 581 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 ENC1O14682 589 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 GGPS1O95749 300 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 ADSSP30520 456 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 MCCD1P59942 119 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-212ENST00000540304 ERVK-9P63128 1117 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 SNRNP35Q16560 246 aaKnown RBP10.46□□□□□ -0.73
CLIP1-212ENST00000540304 EEPD1Q7L9B9 569 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 GOLGA6L1Q8N7Z2 621 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 SEPT1Q8WYJ6 367 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 ALS2CR12Q96Q35 445 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 PCYT2Q99447 389 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 STK33Q9BYT3 514 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 DHX33Q9H6R0 707 aaKnown RBP10.46□□□□□ -0.73
CLIP1-212ENST00000540304 ZNF408Q9H9D4 720 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 MLXIPQ9HAP2 919 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-212ENST00000540304 ADAMTS1Q9UHI8 967 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 DNAJC12Q9UKB3 198 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 CAPN6Q9Y6Q1 641 aa10.46□□□□□ -0.73
CLIP1-212ENST00000540304 F8VZ95 297 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 MOCS3O95396 460 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 ADRB2P07550 413 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 SOX5P35711 763 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 RFC5P40937 340 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 STAT5BP51692 787 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 PPP3CAQ08209 521 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 LY6KQ17RY6 165 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 BRDTQ58F21 947 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-212ENST00000540304 TEX35Q5T0J7 233 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 C10orf76Q5T2E6 689 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 WDR78Q5VTH9 848 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 FBXO38Q6PIJ6 1188 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 ZNF571Q7Z3V5 609 aaPredicted RBP10.46□□□□□ -0.74
CLIP1-212ENST00000540304 RNF10Q8N5U6 811 aaKnown RBP10.46□□□□□ -0.74
CLIP1-212ENST00000540304 ZSWIM2Q8NEG5 633 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 SLC7A3Q8WY07 619 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 RABGGTAQ92696 567 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 KCNN1Q92952 543 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 PORCNQ9H237 461 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.46□□□□□ -0.74
CLIP1-212ENST00000540304 NRBP2Q9NSY0 501 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 PUF60Q9UHX1 559 aaKnown RBP10.46□□□□□ -0.74
CLIP1-212ENST00000540304 ZNF232Q9UNY5 417 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 SAR1BQ9Y6B6 198 aa10.46□□□□□ -0.74
CLIP1-212ENST00000540304 MCM3APO60318 1980 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 GOLGA8IPA6NC78 632 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 GOLGA8JA6NMD2 632 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 HNRNPDLO14979 420 aaKnown RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 PMM2O15305 246 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 H2AFXP16104 143 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 TCF7P36402 384 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 TUBB4BP68371 445 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 C1orf220Q5T0J3 134 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 MAP1SQ66K74 1059 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 SLC39A4Q6P5W5 647 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 VPS36Q86VN1 386 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 CBWD2Q8IUF1 395 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 LMO3Q8TAP4 145 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 MORC4Q8TE76 937 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 FBXL18Q96ME1 805 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 CEP89Q96ST8 783 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 HDAC6Q9UBN7 1215 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 ATP8B3O60423 1300 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 GFPT2O94808 682 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 ARIH2O95376 493 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 POTEJP0CG39 1038 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 PNMA6AP0CW24 399 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 CYP2C8P10632 490 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 CETPP11597 493 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 GARTP22102 1010 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 ARL2P36404 184 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 NAMPTP43490 491 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 GCLMP48507 274 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 BMS1Q14692 1282 aaKnown RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 DRAP1Q14919 205 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 TARBP2Q15633 366 aaKnown RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 EPC2Q52LR7 807 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 DNAAF5Q86Y56 855 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 EXOC8Q8IYI6 725 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 GPR161Q8N6U8 529 aaKnown RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 PLEKHO2Q8TD55 490 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 POMGNT1Q8WZA1 660 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 VTI1AQ96AJ9 217 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 TMEM143Q96AN5 459 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 SAAL1Q96ER3 474 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 THOC1Q96FV9 657 aaKnown RBP10.45□□□□□ -0.74
CLIP1-212ENST00000540304 BICD1Q96G01 975 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms