RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 RSAD2Q8WXG1 361 aa22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 STAMQ92783 540 aa22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 KCNMB3Q9NPA1 279 aa22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 PRG3Q9Y2Y8 225 aaPredicted RBP22.3■■□□□ 1.16
LPCAT3-210ENST00000540090 GLUD1P00367 558 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 ITGA4P13612 1032 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 GBP2P32456 591 aaPredicted RBP22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 ID4P47928 161 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 INF2Q27J81 1249 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 ELMSAN1Q6PJG2 1045 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 C4orf19Q8IY42 314 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 SLC44A3Q8N4M1 653 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 RNF149Q8NC42 400 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 HDAC7Q8WUI4 952 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 NXPE3Q969Y0 559 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 SLKQ9H2G2 1235 aaPredicted RBP22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 IPPQ9Y573 584 aa22.29■■□□□ 1.16
LPCAT3-210ENST00000540090 KRBA1A5PL33 1030 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 GAS2O43903 313 aaKnown RBP22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 C1RP00736 705 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 OR1G1P47890 313 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 GLUD2P49448 558 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 DSG1Q02413 1049 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 DSC1Q08554 894 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 TOB2Q14106 344 aaPredicted RBP22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 PCBP1Q15365 356 aaKnown RBP eCLIP22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 KRT25Q7Z3Z0 450 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 FERMT3Q86UX7 667 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 TCP11Q8WWU5 503 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 MYADMQ96S97 322 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 GAD1Q99259 594 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 RNF39Q9H2S5 420 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 CHST7Q9NS84 486 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 CLUHO75153 1309 aa22.28■■□□□ 1.16
LPCAT3-210ENST00000540090 ARL5CA6NH57 179 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 RFPL2O75678 378 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 CFHP08603 1231 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 YWHABP31946 246 aaKnown RBP22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 EPHA7Q15375 998 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 PPP4R3AQ6IN85 833 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 RUFY3Q7L099 469 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 OTUD6AQ7L8S5 288 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 ZNF707Q96C28 371 aaPredicted RBP22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 ZNF274Q96GC6 653 aaPredicted RBP22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 AIFM3Q96NN9 605 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 EIF2AQ9BY44 585 aaKnown RBP22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 SEMA4AQ9H3S1 761 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 MIOSQ9NXC5 875 aa22.27■■□□□ 1.16
LPCAT3-210ENST00000540090 STK25O00506 426 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 CPLX1O14810 134 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 MYBP10242 640 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 AXLP30530 894 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 EMC2Q15006 297 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 GPR65Q8IYL9 337 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 SMG7Q92540 1137 aaKnown RBP22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 CCDC51Q96ER9 411 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 PLEKHA4Q9H4M7 779 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 ZSWIM6Q9HCJ5 1215 aa22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 BMP2KQ9NSY1 1161 aaPredicted RBP22.26■■□□□ 1.15
LPCAT3-210ENST00000540090 EP300Q09472 2414 aaPredicted RBP22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 TSPAN1O60635 241 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 ERLIN2O94905 339 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 SRFP11831 508 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 GCFC2P16383 781 aaKnown RBP22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 MLH1P40692 756 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 PTENP60484 403 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 NOTUMQ6P988 496 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 HAS1Q92839 578 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 LXNQ9BS40 222 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 COLEC11Q9BWP8 271 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 NT5C3AQ9H0P0 336 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 RGL1Q9NZL6 768 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 HES2Q9Y543 173 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 C2orf16Q68DN1 1984 aa22.25■■□□□ 1.15
LPCAT3-210ENST00000540090 F8W810 466 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 ZBTB39O15060 712 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 TBX3O15119 743 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 NR1I2O75469 434 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 SPATA31D3P0C874 917 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 SCNN1GP51170 649 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 POU5F1BQ06416 359 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 NCBP1Q09161 790 aaKnown RBP22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 MXD4Q14582 209 aaPredicted RBP22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 XKR9Q5GH70 373 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 SPATA31D4Q6ZUB0 917 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 NEK8Q86SG6 692 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 PALB2Q86YC2 1186 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 IFNLR1Q8IU57 520 aaPredicted RBP22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 ZFP42Q96MM3 310 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 CSRNP2Q9H175 543 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 ZSWIM4Q9H7M6 989 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 CA14Q9ULX7 337 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 KCNJ14Q9UNX9 436 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 GIT1Q9Y2X7 761 aa22.24■■□□□ 1.15
LPCAT3-210ENST00000540090 CCDC194A0A1B0GVG4 234 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 TGM5O43548 720 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 LMNAP02545 664 aaKnown RBP22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 LAMP2P13473 410 aa22.23■■□□□ 1.15
LPCAT3-210ENST00000540090 PHLDB3Q6NSJ2 640 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms