RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 DDX39AO00148 427 aaKnown RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 IPO5O00410 1097 aaKnown RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 DYNC1I1O14576 645 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 NCAM2O15394 837 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 LAMTOR5O43504 91 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 NARSO43776 548 aaKnown RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 CCNE2O96020 404 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 TPM3P06753 285 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 ADH1AP07327 375 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 DCNP07585 359 aaKnown RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 CYP3A4P08684 503 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 CNPP09543 421 aaKnown RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 LAMP2P13473 410 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 LIFRP42702 1097 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 MAGEA9P43362 315 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 DNM2P50570 870 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 RAB27AP51159 221 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 GPC3P51654 580 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 LMNB2Q03252 620 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 AP3B2Q13367 1082 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 COL9A2Q14055 689 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 SPECC1Q5M775 1068 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 MCTP1Q6DN14 999 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 SYNE3Q6ZMZ3 975 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 NUDT18Q6ZVK8 323 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 TRMT1LQ7Z2T5 733 aaKnown RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 MB21D2Q8IYB1 491 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 CCDC82Q8N4S0 544 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF713Q8N859 430 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 GPR152Q8TDT2 470 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 RSAD2Q8WXG1 361 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 AUTS2Q8WXX7 1259 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 SCLT1Q96NL6 688 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 FAM193BQ96PV7 902 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-219ENST00000539952 PPP1R16BQ96T49 567 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 TMEM175Q9BSA9 504 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 ANO3Q9BYT9 981 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 BCO2Q9BYV7 579 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 PLEKHA4Q9H4M7 779 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 LY9Q9HBG7 655 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 ARHGEF3Q9NR81 526 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 SLC2A4RGQ9NR83 387 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 TBC1D13Q9NVG8 400 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 CA14Q9ULX7 337 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 PCDHGA2Q9Y5H1 932 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 SLC12A7Q9Y666 1083 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 ZFHX4Q86UP3 3567 aa6.69□□□□□ -1.34
CPSF7-219ENST00000539952 KANSL1LA0AUZ9 987 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 ANHXE9PGG2 379 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 GAS2O43903 313 aaKnown RBP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 TBC1D4O60343 1298 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 N4BP1O75113 896 aaKnown RBP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 PLEKHA8P1O95397 391 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 PAPLNO95428 1278 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 SFPQP23246 707 aaKnown RBP eCLIP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 SREBF1P36956 1147 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 CLCN3P51790 818 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 NAPAP54920 295 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 ANTXR2P58335 489 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 HMGN5P82970 282 aaKnown RBP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 PRKCQQ04759 706 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 ST3GAL2Q16842 350 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 ZSCAN23Q3MJ62 389 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 TWF2Q6IBS0 349 aaKnown RBP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 RSPO2Q6UXX9 243 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 HEATR3Q7Z4Q2 680 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 GPR65Q8IYL9 337 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 CMTR1Q8N1G2 835 aaKnown RBP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 LINC01465Q8N7H1 131 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 URGCPQ8TCY9 931 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 MAP4K1Q92918 833 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 CHAMP1Q96JM3 812 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 HS3ST6Q96QI5 342 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 ZNF577Q9BSK1 485 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 FAM126AQ9BYI3 521 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 NT5C3AQ9H0P0 336 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 PIDD1Q9HB75 910 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 RXFP1Q9HBX9 757 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 UBN1Q9NPG3 1134 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 ZSCAN32Q9NX65 697 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 GABBR1Q9UBS5 961 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 CDV3Q9UKY7 258 aaKnown RBP6.68□□□□□ -1.34
CPSF7-219ENST00000539952 ZKSCAN5Q9Y2L8 839 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 SAMM50Q9Y512 469 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 DOCK5Q9H7D0 1870 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 LOXHD1Q8IVV2 1947 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 CACNA1IQ9P0X4 2223 aa6.68□□□□□ -1.34
CPSF7-219ENST00000539952 EVPLQ92817 2033 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 KIAA1671Q9BY89 1806 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 FAM86B1E9PN63 330 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 NRP1O14786 923 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 INPPL1O15357 1258 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 PRC1O43663 620 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 NR1I2O75469 434 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 GLUD1P00367 558 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 SOD2P04179 222 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 ADRB1P08588 477 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 FAM86B2P0C5J1 330 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 SLC11A1P49279 550 aa6.67□□□□□ -1.34
CPSF7-219ENST00000539952 ADCY7P51828 1080 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms