RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SLC37A4O43826 429 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 LILRB3O75022 631 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 LRRN2O75325 713 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 SRGAP2CP0DJJ0 459 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 GBP2P32456 591 aaPredicted RBP16.68■□□□□ 0.26
USB1-203ENST00000539737 KRT2P35908 639 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 ID4P47928 161 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 JAK3P52333 1124 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 POLGP54098 1239 aaPredicted RBP16.68■□□□□ 0.26
USB1-203ENST00000539737 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 B3GNT9Q6UX72 402 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 RIT2Q99578 217 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 NIFKQ9BYG3 293 aaKnown RBP16.68■□□□□ 0.26
USB1-203ENST00000539737 MIOSQ9NXC5 875 aa16.68■□□□□ 0.26
USB1-203ENST00000539737 MED19A0JLT2 244 aaPredicted RBP16.67■□□□□ 0.26
USB1-203ENST00000539737 ZBTB39O15060 712 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 TEX28O15482 410 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 MAFO75444 373 aaPredicted RBP16.67■□□□□ 0.26
USB1-203ENST00000539737 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
USB1-203ENST00000539737 SFNP31947 248 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 NUBP1P53384 320 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 XKR3Q5GH77 459 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 PLCD3Q8N3E9 789 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 KCNG4Q8TDN1 519 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 C8orf76Q96K31 380 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 APOL6Q9BWW8 343 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 EIF2AQ9BY44 585 aaKnown RBP16.67■□□□□ 0.26
USB1-203ENST00000539737 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 AGPAT5Q9NUQ2 364 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 SPTBN2O15020 2390 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 OTOGLQ3ZCN5 2332 aa16.67■□□□□ 0.26
USB1-203ENST00000539737 CCDC195A0A1B0GUA6 201 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 POTEMA6NI47 508 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 INPPL1O15357 1258 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 RPL17P18621 184 aaKnown RBP16.66■□□□□ 0.26
USB1-203ENST00000539737 HOXA11P31270 313 aaPredicted RBP16.66■□□□□ 0.26
USB1-203ENST00000539737 SAFBQ15424 915 aaKnown RBP eCLIP16.66■□□□□ 0.26
USB1-203ENST00000539737 MOXD1Q6UVY6 613 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 OTOP3Q7RTS5 596 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 CDR2LQ86X02 465 aaPredicted RBP16.66■□□□□ 0.26
USB1-203ENST00000539737 PALB2Q86YC2 1186 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 KIAA2013Q8IYS2 634 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 DCLK2Q8N568 766 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 SMG8Q8ND04 991 aaKnown RBP16.66■□□□□ 0.26
USB1-203ENST00000539737 ETNPPLQ8TBG4 499 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 ACSF2Q96CM8 615 aaPredicted RBP16.66■□□□□ 0.26
USB1-203ENST00000539737 RMDN1Q96DB5 314 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 ZFP42Q96MM3 310 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 RSAD1Q9HA92 442 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 GJB4Q9NTQ9 266 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 FAN1Q9Y2M0 1017 aa16.66■□□□□ 0.26
USB1-203ENST00000539737 CACNA1IQ9P0X4 2223 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 OR1G1P47890 313 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 FOSBP53539 338 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 BMS1Q14692 1282 aaKnown RBP16.65■□□□□ 0.26
USB1-203ENST00000539737 GET4Q7L5D6 327 aaPredicted RBP16.65■□□□□ 0.26
USB1-203ENST00000539737 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
USB1-203ENST00000539737 ZNF710Q8N1W2 664 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 URGCPQ8TCY9 931 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 GPR152Q8TDT2 470 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 PRPF31Q8WWY3 499 aaKnown RBP16.65■□□□□ 0.26
USB1-203ENST00000539737 ZNF707Q96C28 371 aaPredicted RBP16.65■□□□□ 0.26
USB1-203ENST00000539737 GAD1Q99259 594 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 NAP1L4Q99733 375 aaKnown RBP16.65■□□□□ 0.26
USB1-203ENST00000539737 RPP25Q9BUL9 199 aaKnown RBP16.65■□□□□ 0.26
USB1-203ENST00000539737 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 EMILIN2Q9BXX0 1053 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 FOXQ1Q9C009 403 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 TBC1D17Q9HA65 648 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.65■□□□□ 0.26
USB1-203ENST00000539737 COL4A3BPQ9Y5P4 624 aa16.65■□□□□ 0.26
USB1-203ENST00000539737 A0A087WWV3 80 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 ZNF623O75123 536 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 MLH1P40692 756 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 DNM2P50570 870 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 SCNN1GP51170 649 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 NTHL1P78549 312 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 INF2Q27J81 1249 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 Q4G0T1 1027 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 PIK3AP1Q6ZUJ8 805 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 NEK8Q86SG6 692 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 ZNF410Q86VK4 478 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 RDM1Q8NG50 284 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 OXER1Q8TDS5 423 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 FAM193BQ96PV7 902 aaPredicted RBP16.64■□□□□ 0.25
USB1-203ENST00000539737 HERC2P3Q9BVR0 1158 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 MRPL17Q9NRX2 175 aaKnown RBP16.64■□□□□ 0.25
USB1-203ENST00000539737 VAV3Q9UKW4 847 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 CLUHO75153 1309 aa16.64■□□□□ 0.25
USB1-203ENST00000539737 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 MARCH6O60337 910 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 SOD2P04179 222 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 URODP06132 367 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 GLULP15104 373 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 GCFC2P16383 781 aaKnown RBP16.63■□□□□ 0.25
USB1-203ENST00000539737 LAMTOR4Q0VGL1 99 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 GIT2Q14161 759 aa16.63■□□□□ 0.25
USB1-203ENST00000539737 MRPL10Q7Z7H8 261 aaKnown RBP16.63■□□□□ 0.25
USB1-203ENST00000539737 PPFIBP1Q86W92 1011 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms