RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CREB3O43889 395 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 CDC27P30260 824 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 SNRPFP62306 86 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 GPS1Q13098 491 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 SPP2Q13103 211 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 EFTUD2Q15029 972 aaKnown RBP eCLIP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 SBK1Q52WX2 424 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 MTBPQ96DY7 904 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 KRT82Q9NSB4 513 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 KCND2Q9NZV8 630 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 HACD3Q9P035 362 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 M0QYV0 167 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 SLC16A3O15427 465 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 PRR29P0C7W0 189 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 PNMA6AP0CW24 399 aaPredicted RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 VEPH1Q14D04 833 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 SLFNL1Q499Z3 407 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 CELF1Q92879 486 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 KIF12Q96FN5 646 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 TSSK1BQ9BXA7 367 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 FAM217BQ9NTX9 383 aaPredicted RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 PCDHB8Q9UN66 801 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 TARSL2A2RTX5 802 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 APOL1O14791 398 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 STRIP1Q5VSL9 837 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 NUDT18Q6ZVK8 323 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 TRIM59Q8IWR1 403 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 DHX40Q8IX18 779 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 GTF3C2Q8WUA4 911 aaPredicted RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 FNDC3AQ9Y2H6 1198 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 E9PMD0 336 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 PPP2R2AP63151 447 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 NBPF9Q3BBW0 867 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 C12orf60Q5U649 245 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 RASSF3Q86WH2 238 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 ATP11CQ8NB49 1132 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 RBM46Q8TBY0 533 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 RFFLQ8WZ73 363 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 XAB2Q9HCS7 855 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 JPH1Q9HDC5 661 aaPredicted RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 SLC9A2Q9UBY0 812 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 INPP5FQ9Y2H2 1132 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 AFF2P51816 1311 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 GMNCA6NCL1 334 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 CFLARO15519 480 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 AARSP49588 968 aaKnown RBP eCLIP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 CACNB3P54284 484 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 LAMB3Q13751 1172 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 STILQ15468 1287 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 OR6J1Q8NGC5 347 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 PPARGC1AQ9UBK2 798 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 SNX24Q9Y343 169 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 EMSYQ7Z589 1322 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 PIK3R2O00459 728 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 PDXKO00764 312 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 ANP32DO95626 131 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 EEF1DP29692 281 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 NSUN2Q08J23 767 aaKnown RBP eCLIP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 RABL6Q3YEC7 729 aaPredicted RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 CCDC137Q6PK04 289 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 GTSE1Q9NYZ3 720 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 PPRC1Q5VV67 1664 aaKnown RBP6.88□□□□□ -1.31
LSAMP-207ENST00000539563 NMT2O60551 498 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 AP2B1P63010 937 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 CDC26Q8NHZ8 85 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 ULK4Q96C45 1275 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 CEP19Q96LK0 163 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 MAP3K14Q99558 947 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 AGPAT1Q99943 283 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 C7orf25Q9BPX7 421 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 TEKT2Q9UIF3 430 aa6.88□□□□□ -1.31
LSAMP-207ENST00000539563 ITIH6Q6UXX5 1313 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 TADA3O75528 432 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 RCOR2Q8IZ40 523 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 FAM84BQ96KN1 310 aaPredicted RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 SENP1Q9P0U3 644 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 C19orf81C9J6K1 198 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 KRT14P02533 472 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 PRAMEP78395 509 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 CDK17Q00537 523 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 MORF4L2Q15014 288 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 FAM102AQ5T9C2 384 aaPredicted RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 CLEC17AQ6ZS10 378 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 RAB42Q8N4Z0 105 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 OXER1Q8TDS5 423 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 STK33Q9BYT3 514 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 ASPSCR1Q9BZE9 553 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 DNAJC17Q9NVM6 304 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 WDR35Q9P2L0 1181 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 GOLGA8MH3BSY2 632 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 TBX3O15119 743 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 TRPA1O75762 1119 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 PYGLP06737 847 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 SCP2P22307 547 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 HDLBPQ00341 1268 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 CAPRIN1Q14444 709 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 TRADDQ15628 312 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 EXT2Q93063 718 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms