RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 TEKT1Q969V4 418 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 FGFR1OP2Q9NVK5 253 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 FRMD4BQ9Y2L6 1034 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 PCDHA3Q9Y5H8 950 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 ASAP2O43150 1006 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 C21orf2O43822 256 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 EXOC3O60645 756 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 SLITRK3O94933 977 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 AP3B2Q13367 1082 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 CNGA2Q16280 664 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 SIAH1Q8IUQ4 282 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 FAM178BQ8IXR5 827 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 KIF2BQ8N4N8 673 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 FIZ1Q96SL8 496 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 AMNQ9BXJ7 453 aa21.84■■□□□ 1.09
TMEM260-203ENST00000539559 ZNF219Q9P2Y4 722 aaPredicted RBP21.84■■□□□ 1.09
TMEM260-203ENST00000539559 HLA-DOAP06340 250 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 SREBF1P36956 1147 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 NSMFQ6X4W1 530 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 EXOC3L1Q86VI1 746 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 FBXO11Q86XK2 927 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 CCDC50Q8IVM0 306 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 ANKRD42Q8N9B4 389 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 DYDC1Q8WWB3 177 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 PRCCQ92733 491 aaPredicted RBP21.83■■□□□ 1.09
TMEM260-203ENST00000539559 ZSWIM1Q9BR11 485 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 WDR18Q9BV38 432 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 PARVGQ9HBI0 331 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 MYO1EQ12965 1108 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 SNX1Q13596 522 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 ODR4Q5SWX8 454 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 C6orf118Q5T5N4 469 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 THOC1Q96FV9 657 aaKnown RBP21.83■■□□□ 1.09
TMEM260-203ENST00000539559 PCDHB18PQ96TA0 734 aa21.83■■□□□ 1.09
TMEM260-203ENST00000539559 DIS3Q9Y2L1 958 aaKnown RBP21.83■■□□□ 1.09
TMEM260-203ENST00000539559 ATP8B3O60423 1300 aa21.83■■□□□ 1.08
TMEM260-203ENST00000539559 A8MUI8 341 aa21.83■■□□□ 1.08
TMEM260-203ENST00000539559 TCP11X1B4DZS4 312 aa21.83■■□□□ 1.08
TMEM260-203ENST00000539559 CLNS1AP54105 237 aaKnown RBP21.83■■□□□ 1.08
TMEM260-203ENST00000539559 ZKSCAN8Q15776 578 aaPredicted RBP21.83■■□□□ 1.08
TMEM260-203ENST00000539559 SAMD1Q6SPF0 538 aaPredicted RBP21.83■■□□□ 1.08
TMEM260-203ENST00000539559 ZNF720Q7Z2F6 126 aa21.83■■□□□ 1.08
TMEM260-203ENST00000539559 TRMT1LQ7Z2T5 733 aaKnown RBP21.83■■□□□ 1.08
TMEM260-203ENST00000539559 GDAP1Q8TB36 358 aa21.83■■□□□ 1.08
TMEM260-203ENST00000539559 DONSONQ9NYP3 566 aa21.83■■□□□ 1.08
TMEM260-203ENST00000539559 MTRF1LQ9UGC7 380 aaKnown RBP21.83■■□□□ 1.08
TMEM260-203ENST00000539559 FOCADQ5VW36 1801 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 DDTLA6NHG4 134 aaPredicted RBP21.82■■□□□ 1.08
TMEM260-203ENST00000539559 F5H6K3 240 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 AGTP01019 485 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 CHRNA3P32297 505 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 ADCY2Q08462 1091 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 MOXD1Q6UVY6 613 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 SEPT14Q6ZU15 432 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 HS2ST1Q7LGA3 356 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 SYCP3Q8IZU3 236 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 P3H4Q92791 437 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 FAM20AQ96MK3 541 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 PWWP2AQ96N64 755 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 EMSYQ7Z589 1322 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 SYNGAP1Q96PV0 1343 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 QSER1Q2KHR3 1735 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 TBX3O15119 743 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 SGPL1O95470 568 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 RARAP10276 462 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 CDC25CP30307 473 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 GCLMP48507 274 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 TRIP13Q15645 432 aaPredicted RBP21.82■■□□□ 1.08
TMEM260-203ENST00000539559 STRIP1Q5VSL9 837 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 EP400NLQ6ZTU2 488 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 UBL4BQ8N7F7 174 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 LMO3Q8TAP4 145 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 C1orf54Q8WWF1 131 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 HSD17B14Q9BPX1 270 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 SH2D3AQ9BRG2 576 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 GLT8D2Q9H1C3 349 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 KCNQ5Q9NR82 932 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 TRIM33Q9UPN9 1127 aa21.82■■□□□ 1.08
TMEM260-203ENST00000539559 PFASO15067 1338 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 DLATP10515 647 aaKnown RBP21.81■■□□□ 1.08
TMEM260-203ENST00000539559 GBP2P32456 591 aaPredicted RBP21.81■■□□□ 1.08
TMEM260-203ENST00000539559 ITIH4Q14624 930 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 TNIP1Q15025 636 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 CERKLQ49MI3 558 aaPredicted RBP21.81■■□□□ 1.08
TMEM260-203ENST00000539559 SPDYCQ5MJ68 293 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 APOBEC3HQ6NTF7 200 aaKnown RBP21.81■■□□□ 1.08
TMEM260-203ENST00000539559 POLR3CQ9BUI4 534 aaPredicted RBP21.81■■□□□ 1.08
TMEM260-203ENST00000539559 PNMA3Q9UL41 463 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 GH1P01241 217 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 CTNNA2P26232 953 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 PEX5P50542 639 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 DRG2P55039 364 aaKnown RBP21.81■■□□□ 1.08
TMEM260-203ENST00000539559 PPP3CAQ08209 521 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 BFSP1Q12934 665 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 KIF22Q14807 665 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 SEL1L2Q5TEA6 688 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 MIEF2Q96C03 454 aa21.81■■□□□ 1.08
TMEM260-203ENST00000539559 EIF3DO15371 548 aaKnown RBP eCLIP21.8■■□□□ 1.08
TMEM260-203ENST00000539559 ECE2O60344 883 aa21.8■■□□□ 1.08
TMEM260-203ENST00000539559 CALCAP01258 141 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms