RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 SLC12A4Q9UP95 1085 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 RASGRF2O14827 1237 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 ATP2C2O75185 946 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 LRRN2O75325 713 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 NPM3O75607 178 aaKnown RBP10.41□□□□□ -0.74
CDH13-204ENST00000539548 GZMAP12544 262 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 COMTP21964 271 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 MARCKSL1P49006 195 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 CETN1Q12798 172 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 AUHQ13825 339 aaKnown RBP10.41□□□□□ -0.74
CDH13-204ENST00000539548 DOK7Q18PE1 504 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 SH3BP5LQ7L8J4 393 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 SYCP3Q8IZU3 236 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 HOOK2Q96ED9 719 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.41□□□□□ -0.74
CDH13-204ENST00000539548 SAMD15Q9P1V8 674 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 FAM198AQ9UFP1 575 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 MTUS1Q9ULD2 1270 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 USP20Q9Y2K6 914 aa10.41□□□□□ -0.74
CDH13-204ENST00000539548 SMCHD1A6NHR9 2005 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 EMSYQ7Z589 1322 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 PYGMP11217 842 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 TCP10Q12799 353 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 CNGA2Q16280 664 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 ABCB5Q2M3G0 1257 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 ZNF568Q3ZCX4 644 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 EPC2Q52LR7 807 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 FAM182BQ5T319 152 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 INTS8Q75QN2 995 aaKnown RBP10.4□□□□□ -0.74
CDH13-204ENST00000539548 TRMT10CQ7L0Y3 403 aaKnown RBP10.4□□□□□ -0.74
CDH13-204ENST00000539548 TAOK1Q7L7X3 1001 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 SLC13A5Q86YT5 568 aaPredicted RBP10.4□□□□□ -0.74
CDH13-204ENST00000539548 ARHGEF19Q8IW93 802 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 RPUSD2Q8IZ73 545 aaKnown RBP10.4□□□□□ -0.74
CDH13-204ENST00000539548 C12orf50Q8NA57 414 aaPredicted RBP10.4□□□□□ -0.74
CDH13-204ENST00000539548 GIMAP7Q8NHV1 300 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 PRMT1Q99873 361 aaKnown RBP10.4□□□□□ -0.74
CDH13-204ENST00000539548 ELAC2Q9BQ52 826 aaKnown RBP10.4□□□□□ -0.74
CDH13-204ENST00000539548 NSRP1Q9H0G5 558 aaKnown RBP10.4□□□□□ -0.74
CDH13-204ENST00000539548 KCNQ5Q9NR82 932 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 PRR12Q9ULL5 1215 aa10.4□□□□□ -0.74
CDH13-204ENST00000539548 SMIM23A6NLE4 172 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 TMEM110-MUSTN1A8MSY1 372 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 CHMP2AO43633 222 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 GAS7O60861 476 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 EZRP15311 586 aaKnown RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 TAL1P17542 331 aaPredicted RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 CHRNB2P17787 502 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 VAMP7P51809 220 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 RIPK1Q13546 671 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 MESDQ14696 234 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 SIX1Q15475 284 aaPredicted RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 MSL1Q68DK7 614 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 SLC30A10Q6XR72 485 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 TRPM8Q7Z2W7 1104 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 EPS8L3Q8TE67 593 aaKnown RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 PCDHB18PQ96TA0 734 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 WDR11Q9BZH6 1224 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 WRAP73Q9P2S5 460 aaPredicted RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 THSD7AQ9UPZ6 1657 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 PASKQ96RG2 1323 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 TCRBV7S2A1N4TA0A589 114 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 CFAP73A6NFT4 308 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 POLRMTO00411 1230 aaKnown RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 PMM2O15305 246 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 ATP6V1G2O95670 118 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 CYP1A2P05177 515 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 VIMP08670 466 aaKnown RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 RARAP10276 462 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 MAPTP10636 758 aaKnown RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 FGFR4P22455 802 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 CACNB3P54284 484 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 MCCD1P59942 119 aaPredicted RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 DLG4P78352 724 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 PPP3CAQ08209 521 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 ALCAMQ13740 583 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 PPP1R7Q15435 360 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 UBAP2Q5T6F2 1119 aaKnown RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 B3GNT9Q6UX72 402 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 CEP57Q86XR8 500 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 C12orf56Q8IXR9 622 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 CCDC105Q8IYK2 499 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 DAW1Q8N136 415 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 CCDC63Q8NA47 563 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 BANK1Q8NDB2 785 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 SLCO2A1Q92959 643 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 SCLT1Q96NL6 688 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 LRRC19Q9H756 370 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 HOMER3Q9NSC5 361 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 NOCTQ9UK39 431 aaKnown RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 DBR1Q9UK59 544 aaKnown RBP10.39□□□□□ -0.75
CDH13-204ENST00000539548 SYNPO2Q9UMS6 1093 aa10.39□□□□□ -0.75
CDH13-204ENST00000539548 ARHGEF35A5YM69 484 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 ANKRD63C9JTQ0 380 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 G3V3G9 751 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 MAPK13O15264 365 aa10.38□□□□□ -0.75
CDH13-204ENST00000539548 HIP1RO75146 1068 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms