RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 NFYCQ13952 458 aa8.55□□□□□ -1.04
TRAV11-201ENST00000539512 ABHD15Q6UXT9 468 aa8.55□□□□□ -1.04
TRAV11-201ENST00000539512 RHOT1Q8IXI2 618 aa8.55□□□□□ -1.04
TRAV11-201ENST00000539512 DPF2Q92785 391 aa8.55□□□□□ -1.04
TRAV11-201ENST00000539512 EPC1Q9H2F5 836 aa8.55□□□□□ -1.04
TRAV11-201ENST00000539512 ZCCHC4Q9H5U6 513 aa8.55□□□□□ -1.04
TRAV11-201ENST00000539512 ZNF536O15090 1300 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 AP1G1O43747 822 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 B4GALT3O60512 393 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 TRIM13O60858 407 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 RNF151Q2KHN1 245 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 PDZD4Q76G19 769 aaPredicted RBP8.54□□□□□ -1.04
TRAV11-201ENST00000539512 GRAMD1CQ8IYS0 662 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 MSL3Q8N5Y2 521 aaKnown RBP8.54□□□□□ -1.04
TRAV11-201ENST00000539512 SYT8Q8NBV8 401 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 OR5M3Q8NGP4 307 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 ARL8AQ96BM9 186 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 C8orf48Q96LL4 319 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 LRRC37BQ96QE4 947 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 LMF1Q96S06 567 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 CDC5LQ99459 802 aaKnown RBP8.54□□□□□ -1.04
TRAV11-201ENST00000539512 SCOCQ9UIL1 159 aa8.54□□□□□ -1.04
TRAV11-201ENST00000539512 KIF3BO15066 747 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 SLC26A4O43511 780 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 CDC14BO60729 498 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 GASTP01350 101 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 WASP42768 502 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 ADCY7P51828 1080 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 NPEPPSP55786 919 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 PPP2CBP62714 309 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 PPP2CAP67775 309 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 TBR1Q16650 682 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 MST1LQ2TV78 715 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 CATIPQ7Z7H3 387 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 RSPH3Q86UC2 560 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 ZDHHC14Q8IZN3 488 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 RELTQ969Z4 430 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 SENP6Q9GZR1 1112 aaPredicted RBP8.53□□□□□ -1.04
TRAV11-201ENST00000539512 TDP1Q9NUW8 608 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 GEMIN8Q9NWZ8 242 aaKnown RBP8.53□□□□□ -1.04
TRAV11-201ENST00000539512 GPRC5DQ9NZD1 345 aa8.53□□□□□ -1.04
TRAV11-201ENST00000539512 CFAP20Q9Y6A4 193 aaKnown RBP8.53□□□□□ -1.04
TRAV11-201ENST00000539512 A0A1W2PRX2 142 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 HTRA2O43464 458 aaPredicted RBP8.52□□□□□ -1.05
TRAV11-201ENST00000539512 LAMTOR5O43504 91 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 PDCP20941 246 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 HGFACQ04756 655 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 PPP3CAQ08209 521 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 ARHGAP29Q52LW3 1261 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 CCDC157Q569K6 752 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 USP45Q70EL2 814 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 C14orf80Q86SX3 495 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 PQLC1Q8N2U9 271 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 MARCH10Q8NA82 808 aaPredicted RBP8.52□□□□□ -1.05
TRAV11-201ENST00000539512 SHCBP1Q8NEM2 672 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 FEZF2Q8TBJ5 459 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 RABGGTAQ92696 567 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 NEIL1Q96FI4 390 aaPredicted RBP8.52□□□□□ -1.05
TRAV11-201ENST00000539512 BCO1Q9HAY6 547 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 MSL2Q9HCI7 577 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 LANCL2Q9NS86 450 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 SERPINB13Q9UIV8 391 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 OAZ3Q9UMX2 235 aa8.52□□□□□ -1.05
TRAV11-201ENST00000539512 ERC2O15083 957 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 ITGA10O75578 1167 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 POU2F2P09086 479 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 CNR2P34972 360 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 CRHR1P34998 444 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 PTPN7P35236 360 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 PGS1Q32NB8 556 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 THEMIS2Q5TEJ8 643 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 SIAH1Q8IUQ4 282 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 CMTM4Q8IZR5 234 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 CAMKK1Q8N5S9 505 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 GIMAP8Q8ND71 665 aaPredicted RBP8.51□□□□□ -1.05
TRAV11-201ENST00000539512 OR7D4Q8NG98 312 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRAV11-201ENST00000539512 CYFIP2Q96F07 1278 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 GTPBP4Q9BZE4 634 aaKnown RBP8.51□□□□□ -1.05
TRAV11-201ENST00000539512 SEC61A2Q9H9S3 476 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 IL23AQ9NPF7 189 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 TMEM140Q9NV12 185 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 LIMCH1Q9UPQ0 1083 aa8.51□□□□□ -1.05
TRAV11-201ENST00000539512 CNOT4O95628 575 aaKnown RBP8.5□□□□□ -1.05
TRAV11-201ENST00000539512 CR2P20023 1033 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 LPOP22079 712 aaPredicted RBP8.5□□□□□ -1.05
TRAV11-201ENST00000539512 C3orf36Q3SXR2 165 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 PPP4R4Q6NUP7 873 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 LILRA6Q6PI73 481 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 EPM2AIP1Q7L775 607 aaPredicted RBP8.5□□□□□ -1.05
TRAV11-201ENST00000539512 C1QL4Q86Z23 238 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 DRC7Q8IY82 874 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 TTC8Q8TAM2 541 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 CCHCR1Q8TD31 782 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 MVB12AQ96EY5 273 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 DPYSL5Q9BPU6 564 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 TCF25Q9BQ70 676 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 KMT5AQ9NQR1 393 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 PCDHA13Q9Y5I0 950 aa8.5□□□□□ -1.05
TRAV11-201ENST00000539512 VSTM5A8MXK1 200 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms