RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 TCP11Q8WWU5 503 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 PSPC1Q8WXF1 523 aaKnown RBP10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 MRFAP1L1Q96HT8 127 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 ZBTB45Q96K62 511 aaPredicted RBP10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 CBWD1Q9BRT8 395 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 MTG1Q9BT17 334 aaPredicted RBP10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 HAPLN2Q9GZV7 340 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 TSPYL2Q9H2G4 693 aaPredicted RBP10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 MINDY3Q9H8M7 445 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 CHD9Q3L8U1 2897 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 REV3LO60673 3130 aa10.05□□□□□ -0.8
RTN4IP1-204ENST00000539449 A0A087WZ62 844 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 GOLGA8IPA6NC78 632 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 TRIM43BA6NCK2 446 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 RRN3P2A6NIE6 340 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 GOLGA8JA6NMD2 632 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 CETN3O15182 167 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 CSDE1O75534 798 aaKnown RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 AKAP3O75969 853 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 ASGR1P07306 291 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 CYP2C9P11712 490 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 IGFBP4P22692 258 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 CST5P28325 142 aaPredicted RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 ADSSP30520 456 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 HOXC8P31273 242 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 PBX1P40424 430 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 MTIF2P46199 727 aaKnown RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 CYP2J2P51589 502 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 KCNQ1P51787 676 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 TFF2Q03403 129 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 PPP2R5AQ15172 486 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 NFIL3Q16649 462 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 BRDTQ58F21 947 aaPredicted RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 MIIPQ5JXC2 388 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 NFRKBQ6P4R8 1299 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 STXBP4Q6ZWJ1 553 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 RNF149Q8NC42 400 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 KHSRPQ92945 711 aaKnown RBP eCLIP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 TRIM43Q96BQ3 446 aaPredicted RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 HVCN1Q96D96 273 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 BORCS6Q96GS4 357 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 NLRP4Q96MN2 994 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 CEP63Q96MT8 703 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 JPH2Q9BR39 696 aaPredicted RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 FDXACB1Q9BRP7 624 aaPredicted RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 TUBGCP2Q9BSJ2 902 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 TARS2Q9BW92 718 aaKnown RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 FAM49AQ9H0Q0 323 aaPredicted RBP10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 TMEM134Q9H6X4 195 aa10.04□□□□□ -0.8
RTN4IP1-204ENST00000539449 C17orf102A2RUQ5 167 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 MBLAC1A4D2B0 266 aaPredicted RBP10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 K7ERI5 159 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 DNM1LO00429 736 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 GAS2O43903 313 aaKnown RBP10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 MSCO60682 206 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 KPNA6O60684 536 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 IQCF3P0C7M6 154 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 ANK1P16157 1881 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 EEF1GP26641 437 aaKnown RBP10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 CDC25BP30305 580 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 NLRP11P59045 1033 aaKnown RBP10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 PTENP60484 403 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 NHLH1Q02575 133 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 SPAG1Q07617 926 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 GOLGA8FQ08AF8 430 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 GOLGA8DPQ0D2H9 430 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 TMEM62Q0P6H9 643 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 ARID5BQ14865 1188 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 AAK1Q2M2I8 961 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 TRIM60Q495X7 471 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 CCDC40Q4G0X9 1142 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 CEP135Q66GS9 1140 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 GDF6Q6KF10 455 aaPredicted RBP10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 SLC39A5Q6ZMH5 540 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 TMC6Q7Z403 805 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 VSTM4Q8IW00 320 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 TRIM59Q8IWR1 403 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 C12orf56Q8IXR9 622 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 EXOC8Q8IYI6 725 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 CCDC155Q8N6L0 562 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 RDH13Q8NBN7 331 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 RETREG2Q8NC44 543 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 PLEKHO2Q8TD55 490 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 DNAJB3Q8WWF6 145 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 KCNN1Q92952 543 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 WNT8BQ93098 351 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 CTAGE1Q96RT6 745 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 ADAMTS10Q9H324 1103 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 TMEM206Q9H813 350 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 IFT122Q9HBG6 1241 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 SPC25Q9HBM1 224 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 MAGEC2Q9UBF1 373 aaPredicted RBP10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 AKT3Q9Y243 479 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 NRCAMQ92823 1304 aa10.03□□□□□ -0.8
RTN4IP1-204ENST00000539449 SMIM35A0A1B0GVV1 85 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms