RNA–Protein interactions for RNA: ENST00000538859.1

NPIPB4-209, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-209ENST00000538859 CNNM4Q6P4Q7 775 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 LRRC55Q6ZSA7 311 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 KRT26Q7Z3Y9 468 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 RD3Q7Z3Z2 195 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 MTDHQ86UE4 582 aaKnown RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 DDX42Q86XP3 938 aaKnown RBP eCLIP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 ELOA2Q8IYF1 753 aaPredicted RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 SAMD3Q8N6K7 520 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 CELF2-AS1Q8N7Q2 184 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 PDILTQ8N807 584 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 ANKRD53Q8N9V6 530 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 BEND2Q8NDZ0 799 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 HIPK4Q8NE63 616 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 ASB15Q8WXK1 588 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 PGBD4Q96DM1 585 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 C16orf92Q96LL3 132 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 PPP1R10Q96QC0 940 aaKnown RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 PPCSQ9HAB8 311 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 IL23AQ9NPF7 189 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 GNL3LQ9NVN8 582 aaKnown RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 DENND2AQ9ULE3 1009 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 NOB1Q9ULX3 412 aaKnown RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 ASB1Q9Y576 335 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 PCDHA8Q9Y5H6 950 aa2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 RBM8AQ9Y5S9 174 aaKnown RBP2.2□□□□□ -2.06
NPIPB4-209ENST00000538859 FOXP2O15409 715 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 DIAPH1O60610 1272 aaKnown RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 KATNA1O75449 491 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 RECQL4O94761 1208 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 IPO13O94829 963 aaKnown RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 NAT1P18440 290 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 LAG3P18627 525 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 CD53P19397 219 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 DNM2P50570 870 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 ADAM8P78325 824 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 GUCY1A3Q02108 690 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 POU5F1BQ06416 359 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 FOXD4Q12950 439 aaPredicted RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 STRN3Q13033 797 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 TCIRG1Q13488 830 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 RAPGEF1Q13905 1077 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 SART3Q15020 963 aaKnown RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 GFOD2Q3B7J2 385 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 GRAMD1BQ3KR37 738 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 KRTAP27-1Q3LI81 207 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 GAGE13Q4V321 117 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 DALRD3Q5D0E6 543 aaKnown RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 FAM47CQ5HY64 1035 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 C10orf62Q5T681 223 aaPredicted RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 YOD1Q5VVQ6 348 aaPredicted RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 C1QL3Q5VWW1 255 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 ANO1Q5XXA6 986 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 NAIF1Q69YI7 327 aaPredicted RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 FBXO42Q6P3S6 717 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 DDX46Q7L014 1031 aaKnown RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 C14orf80Q86SX3 495 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 PASD1Q8IV76 773 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 LRRC47Q8N1G4 583 aaKnown RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 MB21D1Q8N884 522 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 PLA2G15Q8NCC3 412 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 SUPT20HQ8NEM7 779 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 MDGA1Q8NFP4 955 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 CPT1CQ8TCG5 803 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 LEO1Q8WVC0 666 aaPredicted RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 PTPRN2Q92932 1015 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 ZNF512Q96ME7 567 aaPredicted RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 SCLT1Q96NL6 688 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 FAM193BQ96PV7 902 aaPredicted RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 SMURF1Q9HCE7 757 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 KCNH7Q9NS40 1196 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 ZIM2Q9NZV7 527 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 SWAP70Q9UH65 585 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 MAGEL2Q9UJ55 1249 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 FBXO9Q9UK97 447 aaPredicted RBP2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 RCAN3Q9UKA8 241 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 INTUQ9ULD6 942 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 SORCS3Q9UPU3 1222 aa2.19□□□□□ -2.06
NPIPB4-209ENST00000538859 CCDC163A0A0D9SF12 145 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 E2F8A0AVK6 867 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 SHTN1A0MZ66 631 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 CCDC66A2RUB6 948 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 ARVCFO00192 962 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 IFRD1O00458 451 aaPredicted RBP2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 SCDO00767 359 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 ANP32CO43423 234 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 SCAF4O95104 1147 aaKnown RBP2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 JUNP05412 331 aaKnown RBP2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 VIL1P09327 827 aaKnown RBP2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 U2AF1L5P0DN76 240 aaPredicted RBP2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 VSIG10L2P0DP72 767 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 ZEB1P37275 1124 aaPredicted RBP2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 TRAPPC10P48553 1259 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 NEK2P51955 445 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 NEK4P51957 841 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 ANTXR2P58335 489 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 U2AF1Q01081 240 aaKnown RBP eCLIP2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 PABPC4Q13310 644 aaKnown RBP eCLIP2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 MLC1Q15049 377 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 LRRC41Q15345 812 aa2.18□□□□□ -2.06
NPIPB4-209ENST00000538859 VPS72Q15906 364 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms