RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SHC4Q6S5L8 630 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 LRRC43Q8N309 656 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 DEPTORQ8TB45 409 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 CDK5RAP3Q96JB5 506 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 REEP2Q9BRK0 252 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 STRA6Q9BX79 667 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 MRPL9Q9BYD2 267 aaKnown RBP15.12■□□□□ 0.01
CD9-208ENST00000538834 NRDE2Q9H7Z3 1164 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 UBN1Q9NPG3 1134 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 TBC1D13Q9NVG8 400 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 MIOSQ9NXC5 875 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 LZTS1Q9Y250 596 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 TNFSF13BQ9Y275 285 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 PHLPP2Q6ZVD8 1323 aa15.12■□□□□ 0.01
CD9-208ENST00000538834 VCANP13611 3396 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.11■□□□□ 0.01
CD9-208ENST00000538834 K7ERI5 159 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 MAPTP10636 758 aaKnown RBP15.11■□□□□ 0.01
CD9-208ENST00000538834 LAG3P18627 525 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 IGFBP4P22692 258 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 DNM1Q05193 864 aaKnown RBP15.11■□□□□ 0.01
CD9-208ENST00000538834 DSC1Q08554 894 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 STK38Q15208 465 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 ZRSR1Q15695 479 aaKnown RBP15.11■□□□□ 0.01
CD9-208ENST00000538834 CSPP1Q1MSJ5 1256 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 NOMO2Q5JPE7 1267 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 KCNT2Q6UVM3 1135 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 SLC39A11Q8N1S5 342 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 ACO2Q99798 780 aaKnown RBP15.11■□□□□ 0.01
CD9-208ENST00000538834 ST6GALNAC4Q9H4F1 302 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 RSAD1Q9HA92 442 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 CCDC39Q9UFE4 941 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 PCDHA7Q9UN72 937 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 GIT1Q9Y2X7 761 aa15.11■□□□□ 0.01
CD9-208ENST00000538834 FRMD3A2A2Y4 597 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 FSCN2O14926 492 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 N4BP3O15049 544 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 GTPBP6O43824 516 aaPredicted RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 DDHD2O94830 711 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 SCP2P22307 547 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 NCBP1Q09161 790 aaKnown RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 DMP1Q13316 513 aaPredicted RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 PRPF4BQ13523 1007 aaKnown RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 FOXD4L5Q5VV16 416 aaPredicted RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 CNNM4Q6P4Q7 775 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 GLB1LQ6UWU2 654 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 GPBP1Q86WP2 473 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 CDR2LQ86X02 465 aaPredicted RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 KCNG4Q8TDN1 519 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 FOXD4L4Q8WXT5 416 aaPredicted RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 NXF3Q9H4D5 531 aaKnown RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 ALG13Q9NP73 1137 aaKnown RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 KMT5AQ9NQR1 393 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 KBTBD4Q9NVX7 518 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 LARSQ9P2J5 1176 aaKnown RBP15.1■□□□□ 0.01
CD9-208ENST00000538834 CFAP45Q9UL16 551 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 HES2Q9Y543 173 aa15.1■□□□□ 0.01
CD9-208ENST00000538834 FAM237AA0A1B0GTK4 181 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 CARNS1A5YM72 827 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 ARL5CA6NH57 179 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 MYMKA6NI61 221 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 SLC16A4O15374 487 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 PPP1R37O75864 691 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 FGF18O76093 207 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 PIGRP01833 764 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 GALTP07902 379 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 ITGA4P13612 1032 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 RAD51AP2Q09MP3 1159 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 NAB2Q15742 525 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 CTC1Q2NKJ3 1217 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 XKR4Q5GH76 650 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 RRAGBQ5VZM2 374 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 ALKAL1Q6UXT8 129 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 CCDC73Q6ZRK6 1079 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 ZNF280BQ86YH2 543 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 RNF168Q8IYW5 571 aaPredicted RBP15.09■□□□□ 0.01
CD9-208ENST00000538834 PRDM6Q9NQX0 595 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 AAASQ9NRG9 546 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 KANSL3Q9P2N6 904 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 PCDHB12Q9Y5F1 795 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 C5orf42Q9H799 3197 aa15.09■□□□□ 0.01
CD9-208ENST00000538834 CCDC169A6NNP5 214 aa15.08■□□□□ 0
CD9-208ENST00000538834 NPTXRO95502 500 aa15.08■□□□□ 0
CD9-208ENST00000538834 SSBP05455 408 aaKnown RBP eCLIP15.08■□□□□ 0
CD9-208ENST00000538834 BCAR1P56945 870 aa15.08■□□□□ 0
CD9-208ENST00000538834 GTF2BQ00403 316 aa15.08■□□□□ 0
CD9-208ENST00000538834 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
CD9-208ENST00000538834 BECN1Q14457 450 aa15.08■□□□□ 0
CD9-208ENST00000538834 PTPROQ16827 1216 aa15.08■□□□□ 0
CD9-208ENST00000538834 LONRF3Q496Y0 759 aa15.08■□□□□ 0
CD9-208ENST00000538834 ATF7IP2Q5U623 682 aa15.08■□□□□ 0
CD9-208ENST00000538834 RESP18Q5W5W9 173 aa15.08■□□□□ 0
CD9-208ENST00000538834 ZPBP2Q6X784 338 aa15.08■□□□□ 0
CD9-208ENST00000538834 HAUS6Q7Z4H7 955 aa15.08■□□□□ 0
CD9-208ENST00000538834 COLGALT2Q8IYK4 626 aa15.08■□□□□ 0
CD9-208ENST00000538834 ABI1Q8IZP0 508 aa15.08■□□□□ 0
CD9-208ENST00000538834 RNF169Q8NCN4 708 aa15.08■□□□□ 0
CD9-208ENST00000538834 POF1BQ8WVV4 589 aa15.08■□□□□ 0
CD9-208ENST00000538834 MRPS27Q92552 414 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms