RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 LRRIQ3A6PVS8 624 aaPredicted RBP16.06■□□□□ 0.16
ATL3-203ENST00000538786 K7ERI5 159 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 PRLRP16471 622 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 KLRC1P26715 233 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 TTLL4Q14679 1199 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 KRT39Q6A163 491 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 EXOC8Q8IYI6 725 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 ATP8B4Q8TF62 1192 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 SCFD2Q8WU76 684 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 PACSIN1Q9BY11 444 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 TMEM8AQ9HCN3 771 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 UBE2TQ9NPD8 197 aaPredicted RBP16.06■□□□□ 0.16
ATL3-203ENST00000538786 MORF4L1Q9UBU8 362 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 SNX12Q9UMY4 172 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 COQ4Q9Y3A0 265 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 EXTL3O43909 919 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 SLC26A2P50443 739 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 NAP1L1P55209 391 aaKnown RBP16.06■□□□□ 0.16
ATL3-203ENST00000538786 KIF22Q14807 665 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 ZNF792Q3KQV3 632 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 ARMCX2Q7L311 632 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 ABRAQ8N0Z2 381 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 SYT11Q9BT88 431 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 TMEM134Q9H6X4 195 aa16.06■□□□□ 0.16
ATL3-203ENST00000538786 ARGLU1Q9NWB6 273 aaPredicted RBP16.06■□□□□ 0.16
ATL3-203ENST00000538786 DIS3Q9Y2L1 958 aaKnown RBP16.06■□□□□ 0.16
ATL3-203ENST00000538786 ZNF233A6NK53 670 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 DDX3XO00571 662 aaKnown RBP eCLIP16.05■□□□□ 0.161e-12■■□□□ 13
ATL3-203ENST00000538786 BUB1O43683 1085 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 STRNO43815 780 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 GAS2O43903 313 aaKnown RBP16.05■□□□□ 0.16
ATL3-203ENST00000538786 SRGAP2O75044 1071 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 ADORA2AP29274 412 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 MAP2K1Q02750 393 aaPredicted RBP16.05■□□□□ 0.16
ATL3-203ENST00000538786 CKAP4Q07065 602 aaKnown RBP16.05■□□□□ 0.16
ATL3-203ENST00000538786 MKRN3Q13064 507 aaKnown RBP16.05■□□□□ 0.16
ATL3-203ENST00000538786 SLFN12LQ6IEE8 588 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 ARHGEF19Q8IW93 802 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 C2orf69Q8N8R5 385 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 SLC30A5Q8TAD4 765 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 INTUQ9ULD6 942 aa16.05■□□□□ 0.16
ATL3-203ENST00000538786 MYH9P35579 1960 aaKnown RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 FOXN3O00409 490 aaPredicted RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 ADCY3O60266 1144 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 ZSCAN20P17040 1043 aaPredicted RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 MARK3P27448 753 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 CAPSQ13938 189 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 IER5Q5VY09 327 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 TRIM50Q86XT4 487 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 TCP11Q8WWU5 503 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 PSPC1Q8WXF1 523 aaKnown RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 SMARCAD1Q9H4L7 1026 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 PDGFCQ9NRA1 345 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 TSKSQ9UJT2 592 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 IGKV6-21A0A0C4DH24 114 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 ZBTB42B2RXF5 422 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 LRRN2O75325 713 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 ZBTB48P10074 688 aaPredicted RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 TCP1P17987 556 aaKnown RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 GPC3P51654 580 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 EFNA5P52803 228 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 PLCB4Q15147 1175 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 SPRYD7Q5W111 196 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 FBXL13Q8NEE6 735 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 LNX1Q8TBB1 728 aaPredicted RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 PRPF31Q8WWY3 499 aaKnown RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 COPS5Q92905 334 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 EPC1Q9H2F5 836 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 AGO2Q9UKV8 859 aaKnown RBP16.04■□□□□ 0.16
ATL3-203ENST00000538786 HYOU1Q9Y4L1 999 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
ATL3-203ENST00000538786 PALMO75781 387 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 H2AFZP0C0S5 128 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 CLDN10P78369 228 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 MXD4Q14582 209 aaPredicted RBP16.03■□□□□ 0.16
ATL3-203ENST00000538786 H2AFVQ71UI9 128 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 ZNF467Q7Z7K2 595 aaPredicted RBP16.03■□□□□ 0.16
ATL3-203ENST00000538786 GLYCTKQ8IVS8 523 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 U2AF1L4Q8WU68 220 aaKnown RBP16.03■□□□□ 0.16
ATL3-203ENST00000538786 SEMA4DQ92854 862 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 MMS19Q96T76 1030 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 VTA1Q9NP79 307 aa16.03■□□□□ 0.16
ATL3-203ENST00000538786 TOPORSQ9NS56 1045 aaPredicted RBP16.03■□□□□ 0.16
ATL3-203ENST00000538786 CELF2O95319 508 aaKnown RBP16.02■□□□□ 0.16
ATL3-203ENST00000538786 LDHAP00338 332 aaKnown RBP16.02■□□□□ 0.16
ATL3-203ENST00000538786 DLATP10515 647 aaKnown RBP16.02■□□□□ 0.16
ATL3-203ENST00000538786 CLCN6P51797 869 aa16.02■□□□□ 0.16
ATL3-203ENST00000538786 MFAP3P55082 362 aa16.02■□□□□ 0.16
ATL3-203ENST00000538786 DRP2Q13474 957 aa16.02■□□□□ 0.16
ATL3-203ENST00000538786 PSMD6Q15008 389 aa16.02■□□□□ 0.16
ATL3-203ENST00000538786 IFI16Q16666 785 aaKnown RBP16.02■□□□□ 0.16
ATL3-203ENST00000538786 TMEM63BQ5T3F8 832 aa16.02■□□□□ 0.16
ATL3-203ENST00000538786 TAPT1Q6NXT6 567 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms