RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 PEX26Q7Z412 305 aa13.27□□□□□ -0.28
USP3-203ENST00000538686 ADGRG6Q86SQ4 1221 aa13.27□□□□□ -0.28
USP3-203ENST00000538686 DNAJC1Q96KC8 554 aaKnown RBP13.27□□□□□ -0.28
USP3-203ENST00000538686 SH3GL1Q99961 368 aa13.27□□□□□ -0.28
USP3-203ENST00000538686 CELF4Q9BZC1 486 aaKnown RBP13.27□□□□□ -0.28
USP3-203ENST00000538686 USP29Q9HBJ7 922 aa13.27□□□□□ -0.28
USP3-203ENST00000538686 PLGRKTQ9HBL7 147 aa13.27□□□□□ -0.28
USP3-203ENST00000538686 UBAP1Q9NZ09 502 aa13.27□□□□□ -0.28
USP3-203ENST00000538686 PTPRUQ92729 1446 aa13.27□□□□□ -0.28
USP3-203ENST00000538686 ADGRA3Q8IWK6 1321 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 IQCA1LA6NCM1 817 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 FBP2O00757 339 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 C2CD2LO14523 706 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 EPHB6O15197 1021 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 GYG2O15488 501 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 ADCY3O60266 1144 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 GAS8O95995 478 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 ITGA4P13612 1032 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 HSPA6P17066 643 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 NFKBIAP25963 317 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 ANXA13P27216 316 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 GUCY1A2P33402 732 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 SLCO1A2P46721 670 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 VPS41P49754 854 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 TBL3Q12788 808 aaKnown RBP13.27□□□□□ -0.29
USP3-203ENST00000538686 RABL6Q3YEC7 729 aaPredicted RBP13.27□□□□□ -0.29
USP3-203ENST00000538686 DEPDC1Q5TB30 811 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 ZDHHC24Q6UX98 284 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 VPS52Q8N1B4 723 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 DDX12PQ92771 950 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 MIPEPQ99797 713 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 TRIM51Q9BSJ1 452 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 MAK16Q9BXY0 300 aaKnown RBP13.27□□□□□ -0.29
USP3-203ENST00000538686 STK33Q9BYT3 514 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 SEMA4AQ9H3S1 761 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 PARVBQ9HBI1 364 aa13.27□□□□□ -0.29
USP3-203ENST00000538686 GPC6Q9Y625 555 aaPredicted RBP13.27□□□□□ -0.29
USP3-203ENST00000538686 MYH4Q9Y623 1939 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 A0A0A6YYK5 440 aaPredicted RBP13.26□□□□□ -0.29
USP3-203ENST00000538686 FAM196BA6NMK8 535 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 KLRC4O43908 158 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 MGEA5O60502 916 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 CBX6O95503 412 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 ANPEPP15144 967 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 RAP1GDS1P52306 607 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 NPEPPSP55786 919 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 ARHGAP4P98171 946 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 CDC16Q13042 620 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 PTGDRQ13258 359 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 TAF1BQ53T94 588 aaPredicted RBP13.26□□□□□ -0.29
USP3-203ENST00000538686 ANKRD40Q6AI12 368 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 KLHDC10Q6PID8 442 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 RBM44Q6ZP01 1051 aaKnown RBP13.26□□□□□ -0.29
USP3-203ENST00000538686 SLFN11Q7Z7L1 901 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 SRBD1Q8N5C6 995 aaKnown RBP13.26□□□□□ -0.29
USP3-203ENST00000538686 FBXO25Q8TCJ0 367 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 DTX3LQ8TDB6 740 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 OSBPL10Q9BXB5 764 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 TRIM31Q9BZY9 425 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 GPAMQ9HCL2 828 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 PHTF1Q9UMS5 762 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 FRMD4BQ9Y2L6 1034 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 SPO11Q9Y5K1 396 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 C1orf167Q5SNV9 1468 aa13.26□□□□□ -0.29
USP3-203ENST00000538686 KIAA0391O15091 583 aaKnown RBP13.25□□□□□ -0.29
USP3-203ENST00000538686 MAGEB3O15480 346 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 NDUFB5O43674 189 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 EXOC3O60645 756 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 TCEA3O75764 348 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 LDHAP00338 332 aaKnown RBP13.25□□□□□ -0.29
USP3-203ENST00000538686 MYL6BP14649 208 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 UQCRBP14927 111 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 CHN2P52757 468 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 TUBA4AP68366 448 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 COG7P83436 770 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 PPIDQ08752 370 aaKnown RBP13.25□□□□□ -0.29
USP3-203ENST00000538686 MAPK7Q13164 816 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 NDUFA5Q16718 116 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 FAM47EQ6ZV65 393 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 CCDC125Q86Z20 511 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 ANKRD35Q8N283 1001 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 TRPC4APQ8TEL6 797 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 C10orf82Q8WW14 230 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 COX4I2Q96KJ9 171 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 RNF26Q9BY78 433 aaPredicted RBP13.25□□□□□ -0.29
USP3-203ENST00000538686 DISC1Q9NRI5 854 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 STX8Q9UNK0 236 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 CARD8Q9Y2G2 431 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 KAT6BQ8WYB5 2073 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 PHRF1Q9P1Y6 1649 aaKnown RBP13.25□□□□□ -0.29
USP3-203ENST00000538686 TTLL1O95922 423 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 ANXA1P04083 346 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 GRIA2P42262 883 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 CAMK2BQ13554 666 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 ZNF423Q2M1K9 1284 aa13.25□□□□□ -0.29
USP3-203ENST00000538686 TRMT5Q32P41 509 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms