RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 POTEFA5A3E0 1075 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 MED24O75448 989 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 POTEIP0CG38 1075 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 POTEJP0CG39 1038 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 PPP4CP60510 307 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 STRN3Q13033 797 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 GNPTABQ3T906 1256 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 POTEEQ6S8J3 1075 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 MAPKAPK5Q8IW41 473 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 INPP5DQ92835 1189 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 PCDHB13Q9Y5F0 798 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 FRMPD4Q14CM0 1322 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 FRMPD2Q68DX3 1309 aaPredicted RBP19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 WNK3Q9BYP7 1800 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 UTRNP46939 3433 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 LDHBP07195 334 aaKnown RBP19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 GNAT1P11488 350 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 NOVP48745 357 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 TRAF1Q13077 416 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 CNBD1Q8NA66 436 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 SLC17A8Q8NDX2 589 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 BORCS6Q96GS4 357 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 RPS6KC1Q96S38 1066 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 REEP2Q9BRK0 252 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 GPR88Q9GZN0 384 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 MYLK2Q9H1R3 596 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 AAASQ9NRG9 546 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 SEPT11Q9NVA2 429 aaKnown RBP19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 NKIRAS1Q9NYS0 192 aa19.94■□□□□ 0.78
SFSWAP-207ENST00000538548 GPR75-ASB3A0A0A6YYF3 556 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 ACADSP16219 412 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 CNGA1P29973 690 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 PEX5P50542 639 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 POTEGQ6S5H5 508 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 VSIG1Q86XK7 387 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 PALB2Q86YC2 1186 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 ASAP3Q8TDY4 903 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 C7orf43Q8WVR3 580 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 PITPNM3Q9BZ71 974 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 WHRNQ9P202 907 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 CTTNBP2NLQ9P2B4 639 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 ASB3Q9Y575 518 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 TCEA3O75764 348 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 UPP2O95045 317 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 ECEL1O95672 775 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 RFC4P35249 363 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 POLGP54098 1239 aaPredicted RBP19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 TCEAL1Q15170 157 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 TSNAXIP1Q2TAA8 658 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 ASPRV1Q53RT3 343 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 PPP1R21Q6ZMI0 780 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 MIGA2Q7L4E1 593 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 FAM13CQ8NE31 585 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 NUDCD1Q96RS6 583 aa19.93■□□□□ 0.78
SFSWAP-207ENST00000538548 ADGRA3Q8IWK6 1321 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 TAC1P20366 129 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 RPS6KA3P51812 740 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 YARSP54577 528 aaKnown RBP19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 GSTO1P78417 241 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 KLC1Q07866 573 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 CTTNQ14247 550 aaKnown RBP19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 GALNT15Q8N3T1 639 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 C12orf50Q8NA57 414 aaPredicted RBP19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 TEKT4Q8WW24 435 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 ERP27Q96DN0 273 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 ANKRD2Q9GZV1 360 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 ZNF652Q9Y2D9 606 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 CLIC2O15247 247 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 TTC4O95801 387 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 GM2AP17900 193 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 APBB1IPQ7Z5R6 666 aaPredicted RBP19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 SLC13A5Q86YT5 568 aaPredicted RBP19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 SH3TC2Q8TF17 1288 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 ZFAND2BQ8WV99 257 aa19.92■□□□□ 0.78
SFSWAP-207ENST00000538548 PNMA6FA0A0J9YX94 578 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 SPDYE5A6NIY4 337 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 TP73O15350 636 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 GCLCP48506 637 aaPredicted RBP19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 WASHC2DQ5SRD0 308 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 SYT2Q8N9I0 419 aaPredicted RBP19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 SYT15Q9BQS2 421 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 WNT8AQ9H1J5 351 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 LGALS13Q9UHV8 139 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 ARFGEF1Q9Y6D6 1849 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 TCRBV7S2A1N4TA0A589 114 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 RTN3O95197 1032 aaPredicted RBP19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 PDHA1P08559 390 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 PYGMP11217 842 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 FMO5P49326 533 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 TUBP50607 506 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 FAM186BQ8IYM0 893 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 MORC4Q8TE76 937 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 LRRC37BQ96QE4 947 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 RPL26L1Q9UNX3 145 aaKnown RBP19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 STARD13Q9Y3M8 1113 aa19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 DDX60LQ5H9U9 1706 aaKnown RBP19.91■□□□□ 0.78
SFSWAP-207ENST00000538548 FOXO6A8MYZ6 492 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 COMTP21964 271 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 PSMC2P35998 433 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms