RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 LENG1Q96BZ8 264 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-205ENST00000538545 TAS2R14Q9NYV8 317 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 PTPRJQ12913 1337 aa15.34■□□□□ 0.05
ACTN1-205ENST00000538545 DDX3XO00571 662 aaKnown RBP eCLIP15.33■□□□□ 0.04
ACTN1-205ENST00000538545 ARL2P36404 184 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 PLCB4Q15147 1175 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 NFRKBQ6P4R8 1299 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 PPM1KQ8N3J5 372 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 NOA1Q8NC60 698 aaKnown RBP15.33■□□□□ 0.04
ACTN1-205ENST00000538545 EHBP1Q8NDI1 1231 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 OLIG1Q8TAK6 271 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 SYN2Q92777 582 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-205ENST00000538545 NIFKQ9BYG3 293 aaKnown RBP15.33■□□□□ 0.04
ACTN1-205ENST00000538545 PDE11AQ9HCR9 933 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 EXOC7Q9UPT5 735 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 PLXNB2O15031 1838 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 GTPBP10A4D1E9 387 aaKnown RBP15.33■□□□□ 0.04
ACTN1-205ENST00000538545 ADCY6O43306 1168 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 FTCDO95954 541 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 GRM1Q13255 1194 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 TAPT1Q6NXT6 567 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 GPR142Q7Z601 462 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 DPP9Q86TI2 863 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 RHPN2Q8IUC4 686 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 RNF149Q8NC42 400 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 COG1Q8WTW3 980 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 U2AF1L4Q8WU68 220 aaKnown RBP15.33■□□□□ 0.04
ACTN1-205ENST00000538545 ZNF516Q92618 1163 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 NRBP2Q9NSY0 501 aa15.33■□□□□ 0.04
ACTN1-205ENST00000538545 PDE2AO00408 941 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-205ENST00000538545 SOX5P35711 763 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 ZNF792Q3KQV3 632 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 EPC2Q52LR7 807 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 TAF3Q5VWG9 929 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 FAM160B1Q5W0V3 765 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 ALKBH5Q6P6C2 394 aaKnown RBP15.32■□□□□ 0.04
ACTN1-205ENST00000538545 C12orf56Q8IXR9 622 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 TATDN2Q93075 761 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 NLRP4Q96MN2 994 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 NAGPAQ9UK23 515 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 IVNS1ABPQ9Y6Y0 642 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 RHOXF2BP0C7M4 288 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 ABCB4P21439 1286 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 TNFSF9P41273 254 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 SPOPLQ6IQ16 392 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 MAMDC4Q6UXC1 1216 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 TRAPPC11Q7Z392 1133 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 NPLOC4Q8TAT6 608 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 RHOXF2Q9BQY4 288 aa15.32■□□□□ 0.04
ACTN1-205ENST00000538545 NUCKS1Q9H1E3 243 aaKnown RBP15.32■□□□□ 0.04
ACTN1-205ENST00000538545 ZC3H4Q9UPT8 1303 aaKnown RBP15.32■□□□□ 0.04
ACTN1-205ENST00000538545 IGF2BP3O00425 579 aaKnown RBP eCLIP15.31■□□□□ 0.04
ACTN1-205ENST00000538545 SNAI1O95863 264 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-205ENST00000538545 STAT1P42224 750 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 OSTNP61366 133 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 CYP24A1Q07973 514 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 SV2AQ7L0J3 742 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 GPD1LQ8N335 351 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 KREMEN1Q96MU8 473 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 STK33Q9BYT3 514 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 PALMO75781 387 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 SEC31AO94979 1220 aaKnown RBP15.31■□□□□ 0.04
ACTN1-205ENST00000538545 CLSTN1O94985 981 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 RNASE9P60153 205 aaKnown RBP15.31■□□□□ 0.04
ACTN1-205ENST00000538545 STRN3Q13033 797 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 TTLL4Q14679 1199 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 CRELD2Q6UXH1 353 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-205ENST00000538545 C17orf75Q9HAS0 396 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-205ENST00000538545 MYO1AQ9UBC5 1043 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 HYOU1Q9Y4L1 999 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 SAR1BQ9Y6B6 198 aa15.31■□□□□ 0.04
ACTN1-205ENST00000538545 B4GALT5O43286 388 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 MAFO75444 373 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-205ENST00000538545 ARHGAP1Q07960 439 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 BRDTQ58F21 947 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-205ENST00000538545 SRGAP1Q7Z6B7 1085 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 AFAP1L1Q8TED9 768 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 FAM212AQ96EL1 285 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 ZHX1Q9UKY1 873 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-205ENST00000538545 EFCAB8A8MWE9 144 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 SSTR3P32745 418 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-205ENST00000538545 NAMPTP43490 491 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 LAMTOR4Q0VGL1 99 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 MYBPC2Q14324 1141 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 RSRC2Q7L4I2 434 aaKnown RBP15.3■□□□□ 0.04
ACTN1-205ENST00000538545 CEP120Q8N960 986 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 MINDY3Q9H8M7 445 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 AGO2Q9UKV8 859 aaKnown RBP15.3■□□□□ 0.04
ACTN1-205ENST00000538545 SGPL1O95470 568 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 TNNI1P19237 187 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 CCNA1P78396 465 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 ATP8B4Q8TF62 1192 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 SCFD2Q8WU76 684 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 MS4A14Q96JA4 679 aa15.3■□□□□ 0.04
ACTN1-205ENST00000538545 TCHPQ9BT92 498 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms