RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ZSCAN22P10073 491 aaPredicted RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 AKAP5P24588 427 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 UBA7P41226 1012 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 SLC11A1P49279 550 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 KCNQ1P51787 676 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 RBM10P98175 930 aaKnown RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 PLCB3Q01970 1234 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 GIT2Q14161 759 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 PCBP1Q15365 356 aaKnown RBP eCLIP9.28□□□□□ -0.92
SPARC-208ENST00000538026 NAB2Q15742 525 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 FOXD4L6Q3SYB3 417 aaPredicted RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 NOMO2Q5JPE7 1267 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 AXDND1Q5T1B0 1012 aaPredicted RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 NOTUMQ6P988 496 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 FOXD4L3Q6VB84 417 aaPredicted RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 TMEM161BQ8NDZ6 487 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 VN1R2Q8NFZ6 395 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 RAD54LQ92698 747 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 KIFAP3Q92845 792 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 CCDC51Q96ER9 411 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 ZBTB45Q96K62 511 aaPredicted RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 CCDC43Q96MW1 224 aaKnown RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 ASB2Q96Q27 587 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 GAD1Q99259 594 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 LMAN2LQ9H0V9 348 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 PRMT7Q9NVM4 692 aaPredicted RBP9.28□□□□□ -0.92
SPARC-208ENST00000538026 CACNG4Q9UBN1 327 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 INPP5FQ9Y2H2 1132 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 RWDD3Q9Y3V2 267 aa9.28□□□□□ -0.92
SPARC-208ENST00000538026 WDR87Q6ZQQ6 2873 aa9.27□□□□□ -0.92
SPARC-208ENST00000538026 MYMKA6NI61 221 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 HIDE1A8MVS5 230 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 PTGESO14684 152 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 SLC16A4O15374 487 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 HOXA2O43364 376 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 SLC26A4O43511 780 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 ERLIN2O94905 339 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 GLP2RO95838 553 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 F13A1P00488 732 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 SSBP05455 408 aaKnown RBP eCLIP9.27□□□□□ -0.93
SPARC-208ENST00000538026 PRKCBP05771 671 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 SKIP12755 728 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 PROZP22891 400 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 DDIT3P35638 169 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 RAB27AP51159 221 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 ZNF131P52739 623 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 DSC1Q08554 894 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 KCNC3Q14003 757 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 SLC27A1Q6PCB7 646 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 SHC4Q6S5L8 630 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 TAS1R1Q7RTX1 841 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 LRRC43Q8N309 656 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 KCTD17Q8N5Z5 321 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 CEP120Q8N960 986 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.27□□□□□ -0.93
SPARC-208ENST00000538026 FEZF2Q8TBJ5 459 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 ATXN2LQ8WWM7 1075 aaKnown RBP9.27□□□□□ -0.93
SPARC-208ENST00000538026 KCNN1Q92952 543 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 DNAJC19Q96DA6 116 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 PRIMPOLQ96LW4 560 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 NECAB3Q96P71 396 aaPredicted RBP9.27□□□□□ -0.93
SPARC-208ENST00000538026 ACO2Q99798 780 aaKnown RBP9.27□□□□□ -0.93
SPARC-208ENST00000538026 REEP2Q9BRK0 252 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 PAAF1Q9BRP4 392 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 PANK2Q9BZ23 570 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 IKZF4Q9H2S9 585 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 NSUN3Q9H649 340 aaKnown RBP9.27□□□□□ -0.93
SPARC-208ENST00000538026 UBE2ZQ9H832 354 aaPredicted RBP9.27□□□□□ -0.93
SPARC-208ENST00000538026 RSAD1Q9HA92 442 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 MARCH5Q9NX47 278 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 SNTG2Q9NY99 539 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 KLK14Q9P0G3 267 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 THEGQ9P2T0 379 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 PCDHB12Q9Y5F1 795 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
SPARC-208ENST00000538026 VPS13AQ96RL7 3174 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 PDCD11Q14690 1871 aaKnown RBP9.26□□□□□ -0.93
SPARC-208ENST00000538026 CCDC169A6NNP5 214 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 PER2O15055 1255 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 LILRB3O75022 631 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 TBX10O75333 385 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 BRD1O95696 1058 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 MAPTP10636 758 aaKnown RBP9.26□□□□□ -0.93
SPARC-208ENST00000538026 ITGA4P13612 1032 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 PLS3P13797 630 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 LAG3P18627 525 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 LIG1P18858 919 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 MLH1P40692 756 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 SCNN1GP51170 649 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 ADAM15Q13444 863 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 PRPF4BQ13523 1007 aaKnown RBP9.26□□□□□ -0.93
SPARC-208ENST00000538026 DHX8Q14562 1220 aaKnown RBP9.26□□□□□ -0.93
SPARC-208ENST00000538026 SKIV2LQ15477 1246 aaKnown RBP9.26□□□□□ -0.93
SPARC-208ENST00000538026 E2F4Q16254 413 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 MAPK6Q16659 721 aa9.26□□□□□ -0.93
SPARC-208ENST00000538026 PTPROQ16827 1216 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms