RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ERP44Q9BS26 406 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 PITPNM3Q9BZ71 974 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 UNC45AQ9H3U1 944 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 EBF3Q9H4W6 596 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 PIH1D3Q9NQM4 214 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 GRID1Q9ULK0 1009 aa11.44□□□□□ -0.58
RTN3-208ENST00000537981 PAIP2BQ9ULR5 123 aaKnown RBP11.44□□□□□ -0.58
RTN3-208ENST00000537981 FAM205AQ6ZU69 1335 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 DDX3XO00571 662 aaKnown RBP eCLIP11.43□□□□□ -0.586e-22■■■□□ 17.7
RTN3-208ENST00000537981 PCCAP05165 728 aaPredicted RBP11.43□□□□□ -0.58
RTN3-208ENST00000537981 GYS1P13807 737 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 MARK3P27448 753 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 PCSK6P29122 969 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 STX2P32856 288 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 VPS41P49754 854 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 PTK2Q05397 1052 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 SLC34A1Q06495 639 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 AP1B1Q10567 949 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 WTAPQ15007 396 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 LLGL1Q15334 1064 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 LRRC41Q15345 812 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 LRRC36Q1X8D7 754 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 TMEM53Q6P2H8 277 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 MAP7D3Q8IWC1 876 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 ZDHHC14Q8IZN3 488 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 C4orf32Q8N8J7 132 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 IQCDQ96DY2 449 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 PWWP2AQ96N64 755 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 ADAM33Q9BZ11 813 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 OSGEPQ9NPF4 335 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 MAP3K20Q9NYL2 800 aaKnown RBP11.43□□□□□ -0.58
RTN3-208ENST00000537981 ATP6V0A2Q9Y487 856 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 ZNF532Q9HCE3 1301 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
RTN3-208ENST00000537981 EXOC3O60645 756 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 E2F6O75461 281 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 FGFR1P11362 822 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 ACTN1P12814 892 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 BRAFP15056 766 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 PAOXQ6QHF9 649 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 ZNF571Q7Z3V5 609 aaPredicted RBP11.43□□□□□ -0.58
RTN3-208ENST00000537981 PEX26Q7Z412 305 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 JAMLQ86YT9 394 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 TPCN2Q8NHX9 752 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 MKNK1Q9BUB5 465 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 LSM14BQ9BX40 385 aaKnown RBP11.43□□□□□ -0.58
RTN3-208ENST00000537981 SLITRK6Q9H5Y7 841 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 WDR37Q9Y2I8 494 aa11.43□□□□□ -0.58
RTN3-208ENST00000537981 PASKQ96RG2 1323 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 TOPAZ1Q8N9V7 1692 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 SERPING1P05155 500 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 RXRBP28702 533 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 WDR4P57081 412 aaKnown RBP11.42□□□□□ -0.58
RTN3-208ENST00000537981 ASIC1P78348 528 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 FUT2Q10981 343 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 ZCWPW2Q504Y3 356 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 CLIP3Q96DZ5 547 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 DHRS1Q96LJ7 313 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 CYTH2Q99418 400 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 KBTBD4Q9NVX7 518 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 UBAP1Q9NZ09 502 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 TMEM247A6NEH6 219 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 EYA2O00167 538 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 MAP3K7O43318 606 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 PLCG1P19174 1290 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 ADD2P35612 726 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 RXRGP48443 463 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 KLHL30Q0D2K2 578 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 PLEKHG4Q58EX7 1191 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 KIAA1755Q5JYT7 1200 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 TTC27Q6P3X3 843 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 PHLDB2Q86SQ0 1253 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 JAZF1Q86VZ6 243 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 SRRM1Q8IYB3 904 aaKnown RBP11.42□□□□□ -0.58
RTN3-208ENST00000537981 RASGEF1CQ8N431 466 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 INPP5DQ92835 1189 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 PPP1R9AQ9ULJ8 1098 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 PCDHGB4Q9UN71 923 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 PCDHGB5Q9Y5G0 923 aa11.42□□□□□ -0.58
RTN3-208ENST00000537981 COL16A1Q07092 1604 aaPredicted RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 SPEF2Q9C093 1822 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 CCDC188H7C350 402 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 VILLO15195 856 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 OPHN1O60890 802 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 SPAG7O75391 227 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 ASMTLO95671 621 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 GPSM2P81274 684 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 SULT2A1Q06520 285 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 MOGSQ13724 837 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 THOC5Q13769 683 aaKnown RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 MAN2A1Q16706 1144 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 CTC1Q2NKJ3 1217 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 TMEM63BQ5T3F8 832 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 LRRC8BQ6P9F7 803 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 MTDHQ86UE4 582 aaKnown RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 PDCD7Q8N8D1 485 aaKnown RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 CEP70Q8NHQ1 597 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 FBXO27Q8NI29 283 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms